TreatCFM000663's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cytochrome_P450, Cytochrome P450: CYP75B | 0.003900421 | CYP450 family |
| costunolide biosynthesis | 0.00639795 | plantCyc |
| gossypetin metabolism | 0.00639795 | plantCyc |
| luteolin biosynthesis | 0.00639795 | plantCyc |
| mitochondrial large ribosomal subunit | 0.009563862 | GO:0005762 |
| Cytochrome_P450, Cytochrome P450: CYP71B | 0.010711901 | CYP450 family |
| flavonol biosynthesis | 0.01142728 | plantCyc |
| Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | 0.031312533 | kinase family |
| mitochondrial translation | 0.03216421 | GO:0032543 |
| organic substance metabolic process | 0.040160727 | GO:0071704 |
| primary metabolic process | 0.040657135 | GO:0044238 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000344 | AT1G01280 (3.00E-86) | CYP703A2|cytochrome P450, family 703, subfamily A, polypeptide 2 |
| CRO_T006611 | - | - |
| CRO_T010297 | AT3G17830 (1.00E-12) | DJA4|DNA J protein A4 |
| CRO_T014249 | AT3G47570 (9.00E-158) | Leucine-rich repeat protein kinase family protein |
| CRO_T015109 | AT1G62290 (9.00E-172) | Saposin-like aspartyl protease family protein |
| CRO_T028905 | AT1G07830 (4.00E-33) | ribosomal protein L29 family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000395 | Circadian rhythm - plant positive regulation of long-day photoperiodism, flowering temperature compensation of the circadian clock response to far red light response to blue light Circadian rhythm response to hydrogen peroxide response to cold nucleoplasm negative regulation of transcription from RNA polymerase II promoter receptor-mediated endocytosis Fluorobenzoate degradation Cytochrome_P450, Cytochrome P450: CYP75B Transcription_related, Transcription factor: NF-X1 Transcription_related, Transcription regulator: Pseudo ARR-B transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding scavenger receptor activity | details |
| TreatCFM000662 | Cytochrome_P450, Cytochrome P450: CYP75B costunolide biosynthesis gossypetin metabolism luteolin biosynthesis flavonol biosynthesis Cytochrome_P450, Cytochrome P450: CYP71B Transcription_related, Transcription factor: LOB mitochondrial translation Golgi vesicle transport mitochondrial large ribosomal subunit vesicle docking SNARE complex vesicle fusion endomembrane system Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | details |
| TreatCFM001166 | Cytochrome_P450, Cytochrome P450: CYP78A formation of glycosidic bonds, GlycosylTransferases: GTnc programmed cell death metabolic process gossypetin metabolism leucopelargonidin and leucocyanidin biosynthesis luteolin biosynthesis flavonoid biosynthesis (in equisetum) flavonol biosynthesis leucodelphinidin biosynthesis syringetin biosynthesis glucuronosyltransferase activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII protein catabolic process acetylglucosaminyltransferase activity aspartic-type endopeptidase activity | details |
| TreatCFM001563 | mitochondrial translation nonaprenyl diphosphate biosynthesis II DNA-templated transcription, termination enzyme-directed rRNA pseudouridine synthesis dimethylallyltranstransferase activity aminoacyl-tRNA hydrolase activity RNA binding pseudouridine synthase activity Terpenoid backbone biosynthesis isoprenoid biosynthetic process chloroplast mitochondrial large ribosomal subunit amyloplast | details |
Expression profiles
 Show details about module gene expression profiling |