TreatCFM000796's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| potassium channel activity | 0.005909467 | GO:0005267 |
| homogalacturonan degradation | 0.01152759 | plantCyc |
| Pyruvate metabolism | 0.01274466 | KEGG pathway |
| SNARE interactions in vesicular transport | 0.013424904 | KEGG pathway |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.016589044 | cazy family |
| Transcription_related, Transcription regulator: SET | 0.016589044 | TF family |
| lyase activity | 0.02255245 | GO:0016829 |
| polygalacturonase activity | 0.02255245 | GO:0004650 |
| lipid binding | 0.02255245 | GO:0008289 |
| integral component of membrane | 0.026060516 | GO:0016021 |
| protein secretion | 0.027783758 | GO:0009306 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003483 | AT4G01840 (4.00E-44) | KCO5|Ca2+ activated outward rectifying K+ channel 5 |
| CRO_T009006 | AT1G08110 (1.00E-48) | lactoylglutathione lyase family protein / glyoxalase I family protein |
| CRO_T016064 | AT1G02460 (2.00E-172) | Pectin lyase-like superfamily protein |
| CRO_T018994 | AT3G60950 (5.00E-19) | C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase |
| CRO_T020755 | AT1G12390 (5.00E-39) | Cornichon family protein |
| CRO_T020958 | AT1G11890 (6.00E-57) | ATSEC22|SECRETION 22 |
| CRO_T021804 | AT5G06620 (1.00E-16) | SDG38|SET domain protein 38 |
| CRO_T031100 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001127 | non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 Transcription_related, Transcription factor: SBP mitochondrial DNA metabolic process potassium channel activity mismatched DNA binding large ribosomal subunit rRNA binding protein secretion Mismatch repair SNARE interactions in vesicular transport potassium ion transmembrane transport response to heat ribosome biogenesis integral component of membrane mitochondrial large ribosomal subunit | details |
| TreatCFM001375 | homogalacturonan degradation hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription regulator: SET SNARE interactions in vesicular transport | details |
Expression profiles
 Show details about module gene expression profiling |