TreatCFM000832's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E1: ThiF | 0.003187954 | ubs family |
| L-aspartate biosynthesis | 0.004046968 | plantCyc |
| L-aspartate degradation I | 0.004046968 | plantCyc |
| superpathway of L-isoleucine biosynthesis I | 0.004046968 | plantCyc |
| superpathway of L-threonine biosynthesis | 0.004046968 | plantCyc |
| superpathway of aspartate and asparagine biosynthesis | 0.006875272 | plantCyc |
| SUMO activating enzyme complex | 0.008096328 | GO:0031510 |
| mature ribosome assembly | 0.015627901 | GO:0042256 |
| protein sumoylation | 0.015627901 | GO:0016925 |
| cellular amino acid metabolic process | 0.016487588 | GO:0006520 |
| translational elongation | 0.020806433 | GO:0006414 |
| biosynthetic process | 0.023384767 | GO:0009058 |
| cytosol | 0.024811185 | GO:0005829 |
| L-aspartate:2-oxoglutarate aminotransferase activity | 0.025503752 | GO:0004069 |
| L-phenylalanine:2-oxoglutarate aminotransferase activity | 0.025503752 | GO:0080130 |
| SUMO activating enzyme activity | 0.025503752 | GO:0019948 |
| embryo development ending in seed dormancy | 0.036271658 | GO:0009793 |
| Ribosome biogenesis in eukaryotes | 0.045045248 | KEGG pathway |
| Ubiquitin mediated proteolysis | 0.045045248 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006128 | AT4G02920 (6.00E-41) | unknown protein |
| CRO_T008314 | AT1G63640 (0) | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain |
| CRO_T008596 | AT2G30970 (0) | ASP1|aspartate aminotransferase 1 |
| CRO_T009106 | AT1G51580 (4.00E-07) | RNA-binding KH domain-containing protein |
| CRO_T010211 | AT1G56070 (7.00E-18) | LOS1|LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 |
| CRO_T011668 | AT2G21470 (0) | ATSAE2|SUMO-ACTIVATING ENZYME 2; EMB2764|EMBRYO DEFECTIVE 2764 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001092 | Transcription_related, Transcription factor: G2-like MicroRNAs in cancer Ras signaling pathway amino acid transmembrane transporter activity | details |
Expression profiles
 Show details about module gene expression profiling |