TreatCFM000936's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| peptidase activity | 0.001832828 | GO:0008233 |
| Cdc48p-Npl4p-Vms1p AAA ATPase complex | 0.002600434 | GO:0036266 |
| mitochondria-associated ubiquitin-dependent protein catabolic process | 0.006018992 | GO:0072671 |
| nucleus-associated proteasomal ubiquitin-dependent protein catabolic process | 0.006018992 | GO:0071630 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.007071586 | cazy family |
| proteolysis | 0.010244731 | GO:0006508 |
| glucosinolate metabolic process | 0.010244731 | GO:0019760 |
| hydrolase activity | 0.012858842 | GO:0016787 |
| scopolin beta-glucosidase activity | 0.012858842 | GO:0102483 |
| thiol-dependent ubiquitin-specific protease activity | 0.012858842 | GO:0004843 |
| glycosyl compound metabolic process | 0.017165134 | GO:1901657 |
| glutamine metabolic process | 0.017165134 | GO:0006541 |
| ER-associated ubiquitin-dependent protein catabolic process | 0.017165134 | GO:0030433 |
| beta-glucosidase activity | 0.027375518 | GO:0008422 |
| Starch and sucrose metabolism | 0.03078878 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001776 | AT4G22290 (2.00E-89) | Ubiquitin-specific protease family C19-related protein |
| CRO_T005482 | AT3G18080 (0) | BGLU44|B-S glucosidase 44 |
| CRO_T006135 | AT5G45920 (6.00E-47) | SGNH hydrolase-type esterase superfamily protein |
| CRO_T015550 | AT2G23970 (3.00E-74) | Class I glutamine amidotransferase-like superfamily protein |
| CRO_T024569 | AT1G27850 (4.00E-06) | unknown protein |
| CRO_T025462 | AT3G19540 (3.00E-161) | Protein of unknown function (DUF620) |
| CRO_T028041 | AT1G01930 (7.00E-122) | zinc finger protein-related |
| CRO_T029714 | AT5G45920 (6.00E-29) | SGNH hydrolase-type esterase superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000811 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc carbohydrate metabolic process glucosinolate metabolic process glutamine metabolic process glycosyl compound metabolic process one-carbon metabolic process Nitrogen metabolism scopolin beta-glucosidase activity carbonate dehydratase activity | details |
| TreatCFM001278 | carbohydrate binding UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-sugars interconversion hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:1.11.1: Legume Lectin Domain Kinase racemase and epimerase activity, acting on carbohydrates and derivatives carbohydrate metabolic process Amino sugar and nucleotide sugar metabolism beta-galactosidase activity chaperone binding coenzyme binding response to stimulus response to oxidative stress cytoplasmic, membrane-bounded vesicle | details |
| TreatCFM001554 | Glycolysis / Gluconeogenesis Phenylpropanoid biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |