TreatCFM000945's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Toll and Imd signaling pathway | 0.000709167 | KEGG pathway |
| protein K63-linked ubiquitination | 0.009119644 | GO:0070534 |
| postreplication repair | 0.009119644 | GO:0006301 |
| redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 | 0.010873683 | cazy family |
| Ubiquitin_Proteasome_system, E2: UBC | 0.010873683 | ubs family |
| translational elongation | 0.016645147 | GO:0006414 |
| lignin biosynthetic process | 0.016645147 | GO:0009809 |
| lignin catabolic process | 0.016645147 | GO:0046274 |
| hydroquinone:oxygen oxidoreductase activity | 0.033692667 | GO:0052716 |
| oxidoreductase activity, oxidizing metal ions | 0.033692667 | GO:0016722 |
| ubiquitin protein ligase binding | 0.033692667 | GO:0031625 |
| translation elongation factor activity | 0.033692667 | GO:0003746 |
| copper ion binding | 0.045644389 | GO:0005507 |
| ubiquitin protein ligase activity | 0.045644389 | GO:0061630 |
| ligase activity | 0.045644389 | GO:0016874 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004837 | AT1G23260 (5.00E-34) | MMZ1|MMS ZWEI homologue 1; UEV1A|UBIQUITIN E2 VARIANT 1A |
| CRO_T012754 | - | - |
| CRO_T024958 | AT4G26310 (6.00E-44) | elongation factor P (EF-P) family protein |
| CRO_T026933 | AT4G19400 (2.00E-05) | Profilin family protein |
| CRO_T027946 | AT3G21550 (4.00E-35) | AtDMP2|DUF679 domain membrane protein 2 |
| CRO_T028714 | AT5G48100 (8.00E-168) | LAC15|LACCASE-LIKE 15; TT10|TRANSPARENT TESTA 10 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000670 | plasma membrane Cytochrome_P450, Cytochrome P450: CYP94B Cutin, suberine and wax biosynthesis organophosphate ester transport transmembrane transport organic phosphonate transport Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) translational elongation integral component of membrane aromatase activity organic phosphonate transmembrane-transporting ATPase activity | details |
Expression profiles
 Show details about module gene expression profiling |