TreatCFM000970's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.002659181 | cazy family |
| redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 | 0.008492422 | cazy family |
| alcohol dehydrogenase (NAD) activity | 0.010304159 | GO:0004022 |
| S-(hydroxymethyl)glutathione dehydrogenase activity | 0.010304159 | GO:0051903 |
| dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 0.010304159 | GO:0004579 |
| UDP-glucose 6-dehydrogenase activity | 0.010304159 | GO:0003979 |
| receptor activity | 0.010791643 | GO:0004872 |
| protein phosphatase inhibitor activity | 0.010791643 | GO:0004864 |
| acetaldehyde biosynthesis I | 0.010911484 | plantCyc |
| pyruvate fermentation to ethanol II | 0.010911484 | plantCyc |
| UDP-α-D-glucuronate biosynthesis (from UDP-glucose) | 0.010911484 | plantCyc |
| UDP-D-xylose biosynthesis | 0.010911484 | plantCyc |
| UDP-sugars interconversion | 0.010911484 | plantCyc |
| abscisic acid binding | 0.010930179 | GO:0010427 |
| oligosaccharyltransferase complex | 0.011815964 | GO:0008250 |
| regulation of protein serine/threonine phosphatase activity | 0.012843743 | GO:0080163 |
| protein N-linked glycosylation via asparagine | 0.012843743 | GO:0018279 |
| post-translational protein modification | 0.012843743 | GO:0043687 |
| Glycolysis / Gluconeogenesis | 0.01377981 | KEGG pathway |
| N-Glycan biosynthesis | 0.01377981 | KEGG pathway |
| zinc ion binding | 0.022198904 | GO:0008270 |
| cytoplasm | 0.024649171 | GO:0005737 |
| oxidoreductase activity, acting on CH-OH group of donors | 0.025454806 | GO:0016614 |
| response to biotic stimulus | 0.029815405 | GO:0009607 |
| abscisic acid-activated signaling pathway | 0.038417526 | GO:0009738 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003503 | AT1G30700 (2.00E-11) | FAD-binding Berberine family protein |
| CRO_T016157 | AT3G17611 (5.00E-34) | ATRBL10|RHOMBOID-like protein 10; ATRBL14|RHOMBOID-like protein 14 |
| CRO_T019716 | AT1G64710 (6.00E-105) | GroES-like zinc-binding dehydrogenase family protein |
| CRO_T021940 | AT1G24020 (8.00E-11) | MLP423|MLP-like protein 423 |
| CRO_T024552 | AT4G20820 (1.00E-131) | FAD-binding Berberine family protein |
| CRO_T032634 | AT5G19690 (3.00E-62) | STT3A|staurosporin and temperature sensitive 3-like A |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000219 | Glycolysis / Gluconeogenesis acetaldehyde biosynthesis I pyruvate fermentation to ethanol II UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UDP-D-xylose biosynthesis UDP-sugars interconversion Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 alcohol dehydrogenase (NAD) activity S-(hydroxymethyl)glutathione dehydrogenase activity UDP-glucose 6-dehydrogenase activity receptor activity protein phosphatase inhibitor activity abscisic acid binding | details |
| TreatCFM000371 | response to biotic stimulus defense response redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 L-aspartate biosynthesis L-aspartate degradation I superpathway of L-isoleucine biosynthesis I superpathway of L-threonine biosynthesis UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UDP-D-xylose biosynthesis superpathway of aspartate and asparagine biosynthesis UDP-sugars interconversion regulation of protein serine/threonine phosphatase activity acetaldehyde biosynthesis I pyruvate fermentation to ethanol II alcohol dehydrogenase (NAD) activity UDP-glucose 6-dehydrogenase activity receptor activity L-aspartate:2-oxoglutarate aminotransferase activity S-(hydroxymethyl)glutathione dehydrogenase activity protein phosphatase inhibitor activity abscisic acid binding | details |
| TreatCFM001172 | redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 vindoline and vinblastine biosynthesis oxidation-reduction process protein dephosphorylation protein serine/threonine phosphatase activity metal ion binding oxidoreductase activity, acting on CH-OH group of donors flavin adenine dinucleotide binding dioxygenase activity | details |
Expression profiles
 Show details about module gene expression profiling |