TreatCFM001072's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: MIKC | 0.004248721 | TF family |
| lysyl-tRNA aminoacylation | 0.008096328 | GO:0006430 |
| glycolysis I (from glucose 6-phosphate) | 0.017164606 | plantCyc |
| glycolysis IV (plant cytosol) | 0.017164606 | plantCyc |
| Rubisco shunt | 0.017164606 | plantCyc |
| extracellular space | 0.02359006 | GO:0005615 |
| Lysosome | 0.02359006 | KEGG pathway |
| lysine-tRNA ligase activity | 0.026408352 | GO:0004824 |
| potassium ion binding | 0.028590029 | GO:0030955 |
| pyruvate kinase activity | 0.028590029 | GO:0004743 |
| Aminoacyl-tRNA biosynthesis | 0.033889476 | KEGG pathway |
| glycolytic process | 0.037354328 | GO:0006096 |
| proteolysis involved in cellular protein catabolic process | 0.042989428 | GO:0051603 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007436 | AT3G57230 (9.00E-30) | AGL16|AGAMOUS-like 16 |
| CRO_T018503 | AT3G11710 (1.00E-46) | ATKRS-1|lysyl-tRNA synthetase 1 |
| CRO_T023147 | AT3G46730 (5.00E-27) | NB-ARC domain-containing disease resistance protein |
| CRO_T023308 | AT1G58400 (9.00E-11) | Disease resistance protein (CC-NBS-LRR class) family |
| CRO_T026648 | AT5G45890 (2.00E-106) | SAG12|senescence-associated gene 12 |
| CRO_T031595 | AT2G36580 (0) | Pyruvate kinase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000109 | C-5 methylation of cytosine cellular response to heat lysyl-tRNA aminoacylation DNA methylation on cytosine within a CHH sequence glutaminyl-tRNAgln biosynthesis via transamidation ajmaline and sarpagine biosynthesis lysine-tRNA ligase activity DNA (cytosine-5-)-methyltransferase activity carbon-nitrogen ligase activity, with glutamine as amido-N-donor small GTPase mediated signal transduction | details |
| TreatCFM000792 | Transcription_related, Transcription factor: MIKC lysyl-tRNA aminoacylation lysine-tRNA ligase activity | details |
| TreatCFM000793 | lysyl-tRNA aminoacylation lysine-tRNA ligase activity Aminoacyl-tRNA biosynthesis | details |
| TreatCFM001073 | PcG protein complex Transcription_related, Transcription factor: MIKC Transcription_related, Transcription regulator: SET glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Rubisco shunt Lysine degradation potassium ion binding pyruvate kinase activity | details |
| TreatCFM001397 | lysyl-tRNA aminoacylation lysine-tRNA ligase activity Aminoacyl-tRNA biosynthesis proteolysis involved in cellular protein catabolic process extracellular space Lysosome cysteine-type endopeptidase activity | details |
| TreatCFM001468 | Protein_kinases_phosphatases, PPC:4.5.1.1: Male grem cell-associated kinase (mak) L-glutamine degradation I L-histidine biosynthesis ligase activity 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity oxo-acid-lyase activity galactosylxylosylprotein 3-beta-galactosyltransferase activity imidazoleglycerol-phosphate synthase activity protein O-linked glycosylation via hydroxyproline arabinogalactan protein metabolic process Transcription_related, Transcription factor: MIKC formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
Expression profiles
 Show details about module gene expression profiling |