TreatCFM001104's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: MYB-related | 6.43E-05 | TF family |
| Protein_kinases_phosphatases, PPC:4.1.4: MAP2K | 0.001329591 | kinase family |
| defense response, incompatible interaction | 0.002954864 | GO:0009814 |
| activation of MAPK activity | 0.002954864 | GO:0000187 |
| U2-type spliceosomal complex | 0.006824224 | GO:0005684 |
| U2 snRNP | 0.008280437 | GO:0005686 |
| MAP kinase kinase activity | 0.010424761 | GO:0004708 |
| MAPK cascade | 0.017687317 | GO:0000165 |
| mRNA splicing, via spliceosome | 0.01803847 | GO:0000398 |
| MAPK signaling pathway - plant | 0.01934999 | KEGG pathway |
| MAP kinase activity | 0.019530547 | GO:0004707 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004175 | AT1G06910 (3.00E-06) | TRFL7|TRF-like 7 |
| CRO_T006264 | AT5G16260 (5.00E-137) | ELF9|EARLY FLOWERING 9 |
| CRO_T017768 | - | - |
| CRO_T017819 | AT5G07890 (9.00E-36) | myosin heavy chain-related |
| CRO_T019539 | AT1G51660 (4.00E-32) | ATMEK4|MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 |
| CRO_T025060 | AT1G06910 (3.00E-09) | TRFL7|TRF-like 7 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000032 | details | |
| TreatCFM000069 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000075 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000076 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K Ubiquitin_Proteasome_system, DUB: JAMM defense response, incompatible interaction histone modification activation of MAPK activity transcription elongation from RNA polymerase II promoter cullin deneddylation COP9 signalosome Cdc73/Paf1 complex MAP kinase kinase activity MAP kinase activity transcription coactivator activity transcription from RNA polymerase II promoter MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000095 | defense response, incompatible interaction activation of MAPK activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAP kinase kinase activity lipid transporter activity Base excision repair Lysosome MAPK cascade MAP kinase activity | details |
| TreatCFM000140 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K Ubiquitin_Proteasome_system, DUB: ULP MAP kinase kinase activity U3 snoRNA binding activation of MAPK activity defense response, incompatible interaction rRNA transcription MAP kinase activity embryo sac development maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) MAPK cascade embryo development ending in seed dormancy rRNA binding MAPK signaling pathway - plant Spliceosome | details |
| TreatCFM000160 | Toll and Imd signaling pathway activation of MAPK activity defense response, incompatible interaction mitochondrial mRNA modification protein K63-linked ubiquitination postreplication repair sugar mediated signaling pathway Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAP kinase kinase activity MAPK cascade Transcription_related, Transcription regulator: PHD Ubiquitin_Proteasome_system, E2: UBC MAP kinase activity MAPK signaling pathway - plant | details |
| TreatCFM000247 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K xyloglucan biosynthetic process endomembrane system organization fucose biosynthetic process activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000264 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000265 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000276 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K xyloglucan biosynthetic process defense response, incompatible interaction endomembrane system organization activation of MAPK activity fucose biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase kinase activity aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis salicylic acid mediated signaling pathway DNA recombination unidimensional cell growth MAPK signaling pathway - plant MAP kinase activity MAPK cascade integral component of Golgi membrane | details |
| TreatCFM000278 | cellular component organization Homologous recombination single-organism cellular process lipid transporter activity MAP kinase kinase activity activation of MAPK activity defense response, incompatible interaction Protein_kinases_phosphatases, PPC:4.1.4: MAP2K cellular response to DNA damage stimulus MAP kinase activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK cascade DNA metabolic process MAPK signaling pathway - plant DNA repair | details |
| TreatCFM000280 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000281 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000282 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000286 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000298 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade | details |
| TreatCFM000319 | endomembrane system organization fucose biosynthetic process defense response, incompatible interaction activation of MAPK activity xyloglucan biosynthetic process lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport salicylic acid mediated signaling pathway aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis unidimensional cell growth MAPK cascade adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000331 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000356 | adenosine ribonucleotides de novo biosynthesis Protein_kinases_phosphatases, PPC:4.1.4: MAP2K Transcription_related, Transcription regulator: LUG xyloglucan biosynthetic process endomembrane system organization fucose biosynthetic process defense response, incompatible interaction activation of MAPK activity 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene vacuolar proton-transporting V-type ATPase, V1 domain glycerol-3-phosphate O-acyltransferase activity 9,9'-dicis-carotene:quinone oxidoreductase activity MAP kinase kinase activity 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity cutin biosynthetic process integral component of Golgi membrane formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity glycerol-3-phosphate 2-O-acyltransferase activity galactosyltransferase activity phosphatase activity | details |
| TreatCFM000363 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000398 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000402 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000427 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity Cyanoamino acid metabolism nitrate transport response to nitrate electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity MAP kinase activity photosynthetic electron transport in photosystem II | details |
| TreatCFM000447 | activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity lipid transporter activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAP kinase activity MAPK cascade Lysosome Sesquiterpenoid and triterpenoid biosynthesis isomerase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000457 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity MAP kinase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor MAPK cascade single-organism metabolic process Steroid biosynthesis MAPK signaling pathway - plant membrane part | details |
| TreatCFM000463 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K endomembrane system organization fucose biosynthetic process xyloglucan biosynthetic process defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000466 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of Golgi membrane salicylic acid mediated signaling pathway MAP kinase activity unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000472 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000474 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity structural constituent of cell wall MAP kinase kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAP kinase activity lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000484 | details | |
| TreatCFM000517 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K fucose biosynthetic process defense response, incompatible interaction xyloglucan biosynthetic process activation of MAPK activity endomembrane system organization MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000532 | activation of MAPK activity xyloglucan biosynthetic process defense response, incompatible interaction fucose biosynthetic process endomembrane system organization Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: G2-like MAP kinase activity aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth phosphorelay signal transduction system MAPK cascade | details |
| TreatCFM000537 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000560 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K endomembrane system organization defense response, incompatible interaction fucose biosynthetic process activation of MAPK activity xyloglucan biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis salicylic acid mediated signaling pathway unidimensional cell growth MAPK signaling pathway - plant MAPK cascade transferase activity, transferring glycosyl groups | details |
| TreatCFM000568 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K xyloglucan biosynthetic process defense response, incompatible interaction activation of MAPK activity fucose biosynthetic process endomembrane system organization formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase kinase activity aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis integral component of Golgi membrane MAPK signaling pathway - plant MAP kinase activity salicylic acid mediated signaling pathway unidimensional cell growth MAPK cascade | details |
| TreatCFM000581 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K endomembrane system organization fucose biosynthetic process xyloglucan biosynthetic process defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000590 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K activation of MAPK activity defense response, incompatible interaction Transcription_related, Transcription factor: M-type MAP kinase kinase activity | details |
| TreatCFM000609 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of Golgi membrane salicylic acid mediated signaling pathway MAP kinase activity unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000626 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000638 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K xyloglucan biosynthetic process defense response, incompatible interaction activation of MAPK activity fucose biosynthetic process endomembrane system organization production of siRNA involved in RNA interference RNA phosphodiester bond hydrolysis formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase kinase activity RISC complex integral component of Golgi membrane MAP kinase activity ribonuclease III activity salicylic acid mediated signaling pathway aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis unidimensional cell growth MAPK cascade MAPK signaling pathway - plant cytoplasm | details |
| TreatCFM000647 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAP kinase kinase activity lipid transporter activity activation of MAPK activity defense response, incompatible interaction MAP kinase activity embryo sac development lipid transport mRNA processing Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK cascade rRNA processing MAPK signaling pathway - plant RNA processing | details |
| TreatCFM000661 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K fucose biosynthetic process defense response, incompatible interaction xyloglucan biosynthetic process activation of MAPK activity endomembrane system organization MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000675 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:4.1.4: MAP2K endomembrane system organization fucose biosynthetic process xyloglucan biosynthetic process defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds cell wall macromolecule catabolic process | details |
| TreatCFM000702 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K fucose biosynthetic process defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase kinase activity aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis integral component of Golgi membrane salicylic acid mediated signaling pathway MAP kinase activity unidimensional cell growth MAPK cascade | details |
| TreatCFM000703 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant Transcription_related, Transcription factor: FAR1 intracellular protein transport | details |
| TreatCFM000707 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K endomembrane system organization defense response, incompatible interaction fucose biosynthetic process activation of MAPK activity xyloglucan biosynthetic process MAP kinase kinase activity polyneuridine-aldehyde esterase activity Indole alkaloid biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity alkaloid metabolic process integral component of Golgi membrane salicylic acid mediated signaling pathway aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis unidimensional cell growth MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000710 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity binding MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant intracellular protein transport | details |
| TreatCFM000713 | Toll and Imd signaling pathway Protein_kinases_phosphatases, PPC:4.1.4: MAP2K activation of MAPK activity defense response, incompatible interaction protein K63-linked ubiquitination postreplication repair MAP kinase kinase activity Ubiquitin_Proteasome_system, E2: UBC MAPK cascade MAP kinase activity cytoplasm MAPK signaling pathway - plant ubiquitin protein ligase binding | details |
| TreatCFM000721 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K endomembrane system organization fucose biosynthetic process xyloglucan biosynthetic process defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of Golgi membrane salicylic acid mediated signaling pathway MAP kinase activity unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000725 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000734 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000750 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000764 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity | details |
| TreatCFM000773 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000794 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000855 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K Cdc73/Paf1 complex activation of MAPK activity histone modification defense response, incompatible interaction transcription elongation from RNA polymerase II promoter MAP kinase kinase activity MAPK cascade RNA secondary structure unwinding MAP kinase activity MAPK signaling pathway - plant mRNA surveillance pathway ATP-dependent RNA helicase activity organic cyclic compound binding heterocyclic compound binding | details |
| TreatCFM000881 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant intracellular protein transport | details |
| TreatCFM000886 | activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity lipid transporter activity MAP kinase activity lipid transport Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Transcription_related, Transcription factor: B3 MAPK signaling pathway - plant | details |
| TreatCFM000887 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000905 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K fucose biosynthetic process defense response, incompatible interaction xyloglucan biosynthetic process activation of MAPK activity endomembrane system organization MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000913 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant intracellular protein transport | details |
| TreatCFM000952 | MAPK signaling pathway - plant Protein_kinases_phosphatases, PPC:4.1.4: MAP2K Transcription_related, Transcription factor: EIL fucose biosynthetic process defense response, incompatible interaction xyloglucan biosynthetic process activation of MAPK activity endomembrane system organization MAP kinase kinase activity MAP kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade | details |
| TreatCFM000957 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM000974 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity indole-3-acetyl-amide conjugate biosynthesis vacuolar transport MAP kinase kinase activity | details |
| TreatCFM000976 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000977 | formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:4.1.4: MAP2K fucose biosynthetic process defense response, incompatible interaction activation of MAPK activity endomembrane system organization xyloglucan biosynthetic process MAP kinase kinase activity integral component of Golgi membrane aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis salicylic acid mediated signaling pathway unidimensional cell growth MAP kinase activity MAPK cascade N-Glycan biosynthesis MAPK signaling pathway - plant | details |
| TreatCFM000991 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade DNA replication MAPK signaling pathway - plant | details |
| TreatCFM001016 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K fucose biosynthetic process defense response, incompatible interaction activation of MAPK activity endomembrane system organization xyloglucan biosynthetic process polyneuridine-aldehyde esterase activity MAP kinase kinase activity Indole alkaloid biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity alkaloid metabolic process integral component of Golgi membrane salicylic acid mediated signaling pathway aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis unidimensional cell growth MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM001049 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade Homologous recombination MAPK signaling pathway - plant | details |
| TreatCFM001050 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant intracellular protein transport | details |
| TreatCFM001053 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K fucose biosynthetic process defense response, incompatible interaction xyloglucan biosynthetic process activation of MAPK activity endomembrane system organization MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM001097 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant intracellular protein transport | details |
| TreatCFM001112 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K endomembrane system organization fucose biosynthetic process xyloglucan biosynthetic process defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM001115 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K fucose biosynthetic process defense response, incompatible interaction xyloglucan biosynthetic process activation of MAPK activity endomembrane system organization MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM001120 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K endomembrane system organization defense response, incompatible interaction fucose biosynthetic process activation of MAPK activity xyloglucan biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc DNA integration integral component of Golgi membrane salicylic acid mediated signaling pathway MAP kinase activity aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis unidimensional cell growth MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM001144 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K Transcription_related, Transcription factor: NF-YC activation of MAPK activity defense response, incompatible interaction nucleobase-containing compound metabolic process macromolecule metabolic process MAP kinase kinase activity MAPK cascade MAPK signaling pathway - plant MAP kinase activity | details |
| TreatCFM001174 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity MAP kinase activity MAPK signaling pathway - plant MAPK cascade vesicle-mediated transport ATPase activity, coupled to transmembrane movement of substances | details |
| TreatCFM001189 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K endomembrane system organization fucose biosynthetic process xyloglucan biosynthetic process defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM001223 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAPK cascade MAP kinase activity MAPK signaling pathway - plant Spliceosome | details |
| TreatCFM001260 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM001274 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity MAP kinase kinase activity MAP kinase activity MAPK cascade MAPK signaling pathway - plant | details |
| TreatCFM001306 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM001383 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K DNA replication-independent nucleosome assembly defense response, incompatible interaction activation of MAPK activity nucleosome binding MAP kinase kinase activity MAP kinase activity MAPK cascade | details |
| TreatCFM001416 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM001493 | activation of MAPK activity defense response, incompatible interaction fucose biosynthetic process xyloglucan biosynthetic process endomembrane system organization Ribosome MAP kinase kinase activity lipid transporter activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K structural constituent of ribosome 5S rRNA binding MAP kinase activity translation lipid transport salicylic acid mediated signaling pathway unidimensional cell growth adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII integral component of Golgi membrane MAPK cascade aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) detoxification of reactive carbonyls in chloroplasts Flavonoid biosynthesis flavonoid biosynthesis (in equisetum) leucodelphinidin biosynthesis NAD/NADH phosphorylation and dephosphorylation pinobanksin biosynthesis xyloglucan biosynthesis Lysosome single-organism metabolic process | details |
| TreatCFM001746 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K Toll and Imd signaling pathway regulation of chromatin silencing protein K63-linked ubiquitination isoleucyl-tRNA aminoacylation regulation of histone H3-K9 methylation defense response, incompatible interaction ribosomal large subunit export from nucleus resolution of meiotic recombination intermediates activation of MAPK activity postreplication repair actin cytoskeleton organization regulation of translational fidelity ATP binding MAP kinase kinase activity isoleucine-tRNA ligase activity aminoacyl-tRNA editing activity DNA clamp loader activity Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family MAP kinase activity Ubiquitin_Proteasome_system, E2: UBC ribosomal large subunit biogenesis DNA replication factor C complex ubiquitin protein ligase binding MAPK cascade DNA replication Aminoacyl-tRNA biosynthesis cell cytoplasm MAPK signaling pathway - plant response to abscisic acid DNA repair | details |
| TreatCFM001953 | Toll and Imd signaling pathway protein import into peroxisome matrix protein K63-linked ubiquitination attachment of peroxisome to chloroplast defense response, incompatible interaction activation of MAPK activity fatty acid beta-oxidation protein monoubiquitination postreplication repair photorespiration Protein_kinases_phosphatases, PPC:4.1.4: MAP2K integral component of peroxisomal membrane Peroxisome MAPK cascade MAP kinase kinase activity cytoplasm Transcription_related, Transcription factor: C3H Ubiquitin_Proteasome_system, E2: UBC MAPK signaling pathway - plant embryo development ending in seed dormancy MAP kinase activity | details |
Expression profiles
 Show details about module gene expression profiling |