TreatCFM001169's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| secologanin and strictosidine biosynthesis | 0.009362512 | plantCyc |
| Transcription_related, Transcription regulator: LIM | 0.020231849 | TF family |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.036299135 | cazy family |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.036299135 | cazy family |
| cellular transition metal ion homeostasis | 0.039404155 | GO:0046916 |
| (-)-secologanin biosynthetic process | 0.039404155 | GO:1900994 |
| metal ion transport | 0.039404155 | GO:0030001 |
| cellular protein metabolic process | 0.039404155 | GO:0044267 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003635 | AT1G23980 (1.00E-25) | RING/U-box superfamily protein |
| CRO_T007257 | AT1G52190 (4.00E-164) | NPF1.2|NRT1/ PTR family 1.2; NRT1.11|nitrate transporter 1.11 |
| CRO_T024860 | - | - |
| CRO_T027003 | AT1G22380 (1.00E-77) | AtUGT85A3|UDP-glucosyl transferase 85A3 |
| CRO_T030358 | AT2G16230 (3.00E-172) | O-Glycosyl hydrolases family 17 protein |
| CRO_T032738 | AT2G39900 (4.00E-16) | WLIM2a|WLIM2a |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001168 | Antigen processing and presentation glycosaminoglycan biosynthetic process heparan sulfate proteoglycan biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase Transcription_related, Transcription factor: C2C2-Dof cellular protein metabolic process single-organism process cellular transition metal ion homeostasis metal ion transport adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | details |
Expression profiles
 Show details about module gene expression profiling |