TreatCFM001320's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | 0.004875166 | cazy family |
| sesaminol glucoside biosynthesis | 0.005308548 | plantCyc |
| cellulose microfibril organization | 0.013283142 | GO:0010215 |
| cell growth | 0.013283142 | GO:0016049 |
| Transcription_related, Transcription regulator: mTERF | 0.014598507 | TF family |
| double-stranded DNA binding | 0.016054799 | GO:0003690 |
| transferase activity, transferring hexosyl groups | 0.016054799 | GO:0016758 |
| anchored component of membrane | 0.030336564 | GO:0031225 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000015 | AT1G57590 (1.00E-162) | Pectinacetylesterase family protein |
| CRO_T003769 | AT5G64950 (5.00E-18) | Mitochondrial transcription termination factor family protein |
| CRO_T006473 | AT1G07250 (6.00E-106) | UGT71C4|UDP-glucosyl transferase 71C4 |
| CRO_T014146 | AT1G09790 (1.00E-131) | COBL6|COBRA-like protein 6 precursor |
| CRO_T020343 | AT4G26620 (2.00E-85) | Sucrase/ferredoxin-like family protein |
| CRO_T020352 | AT3G26932 (1.00E-07) | DRB3|dsRNA-binding protein 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000591 | Carbon metabolism Protein_kinases_phosphatases, PPC:1.8.1: Leucine Rich Repeat Kinase I posttranscriptional regulation of gene expression heat acclimation glycolytic process ascorbate glutathione cycle L-ascorbate degradation V L-valine degradation I Rubisco shunt glycolysis IV (plant cytosol) glycolysis I (from glucose 6-phosphate) pyruvate kinase activity potassium ion binding | details |
| TreatCFM000711 | UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-sugars interconversion calcium-mediated signaling root hair cell differentiation phyllome development Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase Transcription_related, Transcription regulator: mTERF racemase and epimerase activity, acting on carbohydrates and derivatives regulation of transcription, DNA-templated Transcription_related, Transcription factor: ERF Amino sugar and nucleotide sugar metabolism | details |
| TreatCFM001023 | L-homoserine biosynthesis L-lysine biosynthesis VI sesaminol glucoside biosynthesis threonine biosynthetic process methionine biosynthetic process isoleucine biosynthetic process core mediator complex homoserine dehydrogenase activity aspartate kinase activity mediator complex proton-transporting ATP synthase complex, catalytic core F(1) RNA polymerase II transcription cofactor activity proton-transporting ATPase activity, rotational mechanism proton-transporting ATP synthase activity, rotational mechanism transferase activity, transferring hexosyl groups amino acid binding NADP binding ATP hydrolysis coupled proton transport ribosomal large subunit assembly ATP synthesis coupled proton transport regulation of transcription from RNA polymerase II promoter formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001629 | adenosine ribonucleotides de novo biosynthesis cell growth cellulose microfibril organization proton-transporting ATPase activity, rotational mechanism proton-transporting ATP synthase activity, rotational mechanism ATP hydrolysis coupled proton transport ATP synthesis coupled proton transport mitochondrion anchored component of membrane proton-transporting ATP synthase complex, catalytic core F(1) Oxidative phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |