TreatCFM001364's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: NF-YA | 0.004785112 | TF family |
| vitamin B6 biosynthetic process | 0.00528167 | GO:0042819 |
| farnesyl diphosphate biosynthetic process | 0.00528167 | GO:0045337 |
| geranyl diphosphate biosynthetic process | 0.00528167 | GO:0033384 |
| pyridoxine metabolic process | 0.00528167 | GO:0008614 |
| geranylgeranyl diphosphate biosynthetic process | 0.00528167 | GO:0033386 |
| pyridoxal phosphate biosynthetic process | 0.006601112 | GO:0042823 |
| glutaminase complex | 0.007710803 | GO:1903600 |
| triglyceride biosynthetic process | 0.008248952 | GO:0019432 |
| carotenoid biosynthetic process | 0.008248952 | GO:0016117 |
| glutaminase activity | 0.008832789 | GO:0004359 |
| phospholipid:diacylglycerol acyltransferase activity | 0.008832789 | GO:0046027 |
| farnesyltranstransferase activity | 0.008832789 | GO:0004311 |
| geranyltranstransferase activity | 0.008832789 | GO:0004337 |
| Vitamin B6 metabolism | 0.00974673 | KEGG pathway |
| trans, trans-farnesyl diphosphate biosynthesis | 0.010524834 | plantCyc |
| geranylgeranyl diphosphate biosynthesis | 0.010524834 | plantCyc |
| polyisoprenoid biosynthesis | 0.010524834 | plantCyc |
| pyridoxal 5'-phosphate biosynthesis II | 0.010524834 | plantCyc |
| superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) | 0.010524834 | plantCyc |
| superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) | 0.010524834 | plantCyc |
| L-glutamine degradation I | 0.010708821 | plantCyc |
| phospholipid remodeling (phosphatidylcholine, yeast) | 0.010708821 | plantCyc |
| dimethylallyltranstransferase activity | 0.011773572 | GO:0004161 |
| potassium ion transmembrane transporter activity | 0.012609882 | GO:0015079 |
| O-acyltransferase activity | 0.012609882 | GO:0008374 |
| Glycerolipid metabolism | 0.017164606 | KEGG pathway |
| Terpenoid backbone biosynthesis | 0.017164606 | KEGG pathway |
| Transcription_related, Transcription factor: NAC | 0.019577886 | TF family |
| potassium ion transmembrane transport | 0.022695204 | GO:0071805 |
| diacylglycerol and triacylglycerol biosynthesis | 0.023996409 | plantCyc |
| stromule | 0.028887748 | GO:0010319 |
| protein heterodimerization activity | 0.046906778 | GO:0046982 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T011257 | AT1G31120 (0) | KUP10|K+ uptake permease 10 |
| CRO_T021797 | AT3G44830 (0) | Lecithin:cholesterol acyltransferase family protein |
| CRO_T025827 | AT1G01720 (2.00E-100) | ANAC002|Arabidopsis NAC domain containing protein 2 |
| CRO_T026116 | AT2G26680 (2.00E-118) | |
| CRO_T031389 | AT4G36810 (2.00E-115) | GGPPS11|geranyl(geranyl)diphosphate synthase 11; GGPS1|geranylgeranyl pyrophosphate synthase 1; LSU|Large subunit of Heterodimeric geranyl(geranyl)diphosphate synthase |
| CRO_T033763 | AT5G60540 (5.00E-89) | ATPDX2|PYRIDOXINE BIOSYNTHESIS 2; EMB2407|EMBRYO DEFECTIVE 2407 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000549 | gluconeogenesis I Insulin signaling pathway Protein_kinases_phosphatases, PPC:4.2.2: Phosphoenolpyruvate Carboxylase Kinase Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase Transcription_related, Transcription factor: G2-like | details |
| TreatCFM000691 | Transcription_related, Transcription regulator: TAZ D-myo-inositol (1,4,5)-trisphosphate degradation gluconeogenesis I sporopollenin precursors biosynthesis nucleus sporopollenin biosynthetic process malate metabolic process phosphatidylinositol dephosphorylation embryo sac development histone acetylation malate dehydrogenase (decarboxylating) (NAD+) activity cinnamoyl-CoA reductase activity Transcription_related, Transcription factor: NAC Ubiquitin_Proteasome_system, E3 adaptor: BTB regulation of transcription, DNA-templated pollen development histone acetyltransferase activity transcription cofactor activity | details |
Expression profiles
 Show details about module gene expression profiling |