TreatCFM001420's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase | 0.005131975 | kinase family |
| coenzyme A metabolic process | 0.015419326 | GO:0015936 |
| mevalonate pathway I | 0.01919385 | plantCyc |
| glycolysis I (from glucose 6-phosphate) | 0.019505234 | plantCyc |
| glycolysis IV (plant cytosol) | 0.019505234 | plantCyc |
| Rubisco shunt | 0.019505234 | plantCyc |
| hydroxymethylglutaryl-CoA reductase (NADPH) activity | 0.023557586 | GO:0004420 |
| pyruvate kinase activity | 0.025503752 | GO:0004743 |
| potassium ion binding | 0.025503752 | GO:0030955 |
| isoprenoid biosynthetic process | 0.033927961 | GO:0008299 |
| abscisic acid-activated signaling pathway | 0.033927961 | GO:0009738 |
| glycolytic process | 0.033927961 | GO:0006096 |
| protein autophosphorylation | 0.033927961 | GO:0046777 |
| peptidyl-serine phosphorylation | 0.033927961 | GO:0018105 |
| calcium-dependent protein serine/threonine kinase activity | 0.03526856 | GO:0009931 |
| calmodulin-dependent protein kinase activity | 0.03526856 | GO:0004683 |
| Plant-pathogen interaction | 0.036857422 | KEGG pathway |
| Terpenoid backbone biosynthesis | 0.036857422 | KEGG pathway |
| NADP binding | 0.045012143 | GO:0050661 |
| intracellular signal transduction | 0.048704628 | GO:0035556 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T009628 | AT1G21370 (2.00E-141) | unknown protein |
| CRO_T017255 | AT1G76490 (7.00E-92) | HMG1|hydroxy methylglutaryl CoA reductase 1; HMGR1|3-HYDROXY-3-METHYLGLUTARYL COA REDUCTASE 1; MAD3|miRNA action deficient 3 |
| CRO_T019882 | AT2G38910 (2.00E-133) | CPK20|calcium-dependent protein kinase 20 |
| CRO_T020772 | AT1G03103 (3.00E-19) | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| CRO_T025972 | AT3G04050 (0) | Pyruvate kinase family protein |
| CRO_T031128 | AT2G31030 (3.00E-173) | ORP1B|OSBP(oxysterol binding protein)-related protein 1B |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001351 | sphingomyelin synthase activity sphingolipid biosynthesis (plants) sulfotransferase activity | details |
| TreatCFM001388 | Carbon metabolism Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase cytoplasmic side of endosome membrane early endosome to late endosome transport early endosome pentose phosphate pathway (oxidative branch) I glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Rubisco shunt Plant-pathogen interaction potassium ion binding phosphogluconate dehydrogenase (decarboxylating) activity pyruvate kinase activity cytoplasm pentose-phosphate shunt calcium-dependent protein serine/threonine kinase activity calmodulin-dependent protein kinase activity protein autophosphorylation glycolytic process peptidyl-serine phosphorylation abscisic acid-activated signaling pathway small GTPase mediated signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |