TreatCFM001531's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formate catabolic process | 0.004402042 | GO:0042183 |
| attachment of peroxisome to chloroplast | 0.004402042 | GO:0010381 |
| serine family amino acid biosynthetic process | 0.004402042 | GO:0009070 |
| formate dehydrogenase (NAD+) activity | 0.005139775 | GO:0008863 |
| NADPH-hemoprotein reductase activity | 0.005139775 | GO:0003958 |
| phosphoglycerate dehydrogenase activity | 0.005139775 | GO:0004617 |
| protein monoubiquitination | 0.006600137 | GO:0006513 |
| protein import into peroxisome matrix | 0.006600137 | GO:0016558 |
| protein homooligomerization | 0.006600137 | GO:0051260 |
| phenylpropanoid metabolic process | 0.006600137 | GO:0009698 |
| fatty acid beta-oxidation | 0.006600137 | GO:0006635 |
| photorespiration | 0.007332402 | plantCyc |
| Peroxisome | 0.01804373 | KEGG pathway |
| integral component of peroxisomal membrane | 0.01930423 | GO:0005779 |
| FMN binding | 0.030774919 | GO:0010181 |
| cytosol | 0.039444351 | GO:0005829 |
| response to abscisic acid | 0.043374643 | GO:0009737 |
| protein binding | 0.043482007 | GO:0005515 |
| NAD binding | 0.043482007 | GO:0051287 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001672 | AT4G24520 (0) | AR1|ARABIDOPSIS CYTOCHROME REDUCTASE; ATR1|P450 reductase 1 |
| CRO_T003817 | AT2G24240 (0) | BTB/POZ domain with WD40/YVTN repeat-like protein |
| CRO_T013233 | AT3G03560 (3.00E-17) | unknown protein |
| CRO_T025948 | AT3G19480 (1.00E-22) | PGDH3|phosphoglycerate dehydrogenase 3 |
| CRO_T028590 | - | - |
| CRO_T033430 | AT1G31660 (8.00E-131) | ENP1|Essential Nuclear Protein 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000379 | Toll and Imd signaling pathway postreplication repair fatty acid beta-oxidation protein K63-linked ubiquitination protein monoubiquitination protein import into peroxisome matrix attachment of peroxisome to chloroplast photorespiration Peroxisome Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase integral component of peroxisomal membrane Ubiquitin_Proteasome_system, E2: UBC embryo development ending in seed dormancy | details |
| TreatCFM001374 | serine family amino acid biosynthetic process formate catabolic process phosphoglycerate dehydrogenase activity formate dehydrogenase (NAD+) activity hydrogen peroxide catabolic process response to oxidative stress cellular oxidant detoxification oxidation-reduction process peroxidase activity heterocyclic compound binding organic cyclic compound binding NAD binding | details |
| TreatCFM001403 | Toll and Imd signaling pathway phenylpropanoid metabolic process postreplication repair protein K63-linked ubiquitination protein homooligomerization Ubiquitin_Proteasome_system, E2: UBC NADPH-hemoprotein reductase activity ubiquitin protein ligase binding FMN binding response to abscisic acid ubiquitin protein ligase activity ligase activity | details |
| TreatCFM001823 | Toll and Imd signaling pathway protein monoubiquitination protein import into peroxisome matrix protein homooligomerization postreplication repair phenylpropanoid metabolic process attachment of peroxisome to chloroplast fatty acid beta-oxidation protein K63-linked ubiquitination photorespiration Peroxisome NADPH-hemoprotein reductase activity integral component of peroxisomal membrane cytosol Ubiquitin_Proteasome_system, E2: UBC response to abscisic acid FMN binding ubiquitin protein ligase binding | details |
| TreatCFM001953 | Toll and Imd signaling pathway protein import into peroxisome matrix protein K63-linked ubiquitination attachment of peroxisome to chloroplast defense response, incompatible interaction activation of MAPK activity fatty acid beta-oxidation protein monoubiquitination postreplication repair photorespiration Protein_kinases_phosphatases, PPC:4.1.4: MAP2K integral component of peroxisomal membrane Peroxisome MAPK cascade MAP kinase kinase activity cytoplasm Transcription_related, Transcription factor: C3H Ubiquitin_Proteasome_system, E2: UBC MAPK signaling pathway - plant embryo development ending in seed dormancy MAP kinase activity | details |
Expression profiles
 Show details about module gene expression profiling |