TreatCFM001549's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| DNA demethylase activity | 0.015406466 | GO:0035514 |
| DNA demethylation | 0.017104062 | GO:0080111 |
| innate immune response | 0.02137439 | GO:0045087 |
| hydrogen-exporting ATPase activity, phosphorylative mechanism | 0.02711211 | GO:0008553 |
| ATP binding | 0.02711211 | GO:0005524 |
| protein serine/threonine kinase activity | 0.02711211 | GO:0004674 |
| regulation of intracellular pH | 0.029900278 | GO:0051453 |
| ATP biosynthetic process | 0.029900278 | GO:0006754 |
| Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | 0.034361033 | kinase family |
| Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) | 0.034361033 | kinase family |
| non-membrane spanning protein tyrosine kinase activity | 0.046104804 | GO:0004715 |
| ubiquitin protein ligase binding | 0.0473561 | GO:0031625 |
| Oxidative phosphorylation | 0.049998209 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008289 | AT5G18610 (3.00E-152) | Protein kinase superfamily protein |
| CRO_T011371 | AT1G17260 (0) | AHA10|autoinhibited H(+)-ATPase isoform 10 |
| CRO_T012932 | AT2G22260 (5.00E-80) | ALKBH2|homolog of E. coli alkB |
| CRO_T014270 | AT1G63690 (0) | ATSPPL2|SIGNAL PEPTIDE PEPTIDASE-LIKE 2 |
| CRO_T015495 | AT1G55690 (3.00E-82) | Sec14p-like phosphatidylinositol transfer family protein |
| CRO_T015766 | AT4G32300 (0) | SD2-5|S-domain-2 5 |
| CRO_T026356 | AT5G08139 (5.00E-21) | RING/U-box superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001216 | Glycerophospholipid metabolism calcium-dependent ATPase activity barrier septum site selection innate immune response phospholipid biosynthetic process chloroplast fission Wnt signaling pathway regulation of cell shape carboxy-lyase activity Endocytosis protein serine/threonine kinase activity ATP binding Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII non-membrane spanning protein tyrosine kinase activity peptidyl-tyrosine phosphorylation peptidyl-serine phosphorylation | details |
| TreatCFM001548 | Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase peptidyl-serine phosphorylation fatty acid biosynthetic process abscisic acid-activated signaling pathway protein autophosphorylation intracellular signal transduction phosphoprotein phosphatase activity calcium-dependent protein serine/threonine kinase activity calmodulin-dependent protein kinase activity Oxidative phosphorylation calmodulin binding | details |
| TreatCFM001618 | formation of glycosidic bonds, GlycosylTransferases: GTnc trehalose biosynthetic process regulation of intracellular pH phospholipid translocation ATP biosynthetic process phospholipid-translocating ATPase activity alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity hydrogen-exporting ATPase activity, phosphorylative mechanism acetylglucosaminyltransferase activity hydrogen ion transmembrane transport nucleotidyltransferase activity | details |
| TreatCFM001951 | calcium-dependent ATPase activity DNA demethylase activity Porphyrin and chlorophyll metabolism barrier septum site selection DNA demethylation chlorophyllase activity innate immune response activation of GTPase activity chloroplast fission chlorophyll catabolic process regulation of vesicle fusion Rab GTPase binding protein polyubiquitination non-membrane spanning protein tyrosine kinase activity GTPase activator activity Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII peptidyl-tyrosine phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |