TreatCFM001619's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Plant hormone signal transduction | 0.000345822 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:1.16.1: Receptor Like Cytoplasmic Kinase II | 0.001417916 | kinase family |
| tRNA wobble uridine modification | 0.010339733 | GO:0002098 |
| protein phosphorylation | 0.01335398 | GO:0006468 |
| cytochrome-b5 reductase activity, acting on NAD(P)H | 0.015579618 | GO:0004128 |
| positive regulation of GTPase activity | 0.021115595 | GO:0043547 |
| Rho guanyl-nucleotide exchange factor activity | 0.033730906 | GO:0005089 |
| oxidation-reduction process | 0.039363527 | GO:0055114 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005102 | AT1G63500 (1.00E-49) | BSK7|brassinosteroid-signaling kinase 7 |
| CRO_T016534 | AT3G07060 (5.00E-170) | emb1974|embryo defective 1974 |
| CRO_T017788 | AT1G60660 (2.00E-13) | ATCB5LP|ARABIDOPSIS CYTOCHROME B5-LIKE PROTEIN; CB5LP|cytochrome B5-like protein |
| CRO_T026938 | AT1G31600 (4.00E-103) | AtTRM9|tRNA methyltransferase 9 |
| CRO_T032186 | AT5G41260 (3.00E-124) | BSK8|brassinosteroid-signaling kinase 8 |
| CRO_T032676 | AT5G19590 (3.00E-16) | Protein of unknown function, DUF538 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001073 | PcG protein complex Transcription_related, Transcription factor: MIKC Transcription_related, Transcription regulator: SET glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Rubisco shunt Lysine degradation potassium ion binding pyruvate kinase activity | details |
| TreatCFM001898 | RIG-I-like receptor signaling pathway DNA methylation on cytosine tRNA wobble uridine modification Cysteine and methionine metabolism cytochrome-b5 reductase activity, acting on NAD(P)H nucleic acid binding Rho guanyl-nucleotide exchange factor activity nucleotide binding RNA secondary structure unwinding positive regulation of GTPase activity oxidation-reduction process | details |
Expression profiles
 Show details about module gene expression profiling |