TreatCFM001656's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| jasmonic acid biosynthetic process | 0.004785112 | GO:0009695 |
| jasmonic acid biosynthesis | 0.007072836 | plantCyc |
| fatty-acyl-CoA synthase activity | 0.007819149 | GO:0004321 |
| Transcription_related, Transcription regulator: LIM | 0.008766873 | TF family |
| Ubiquitin_Proteasome_system, DUB: ULP | 0.008766873 | ubs family |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.023928528 | cazy family |
| acetylglucosaminyltransferase activity | 0.026031111 | GO:0008375 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T014728 | AT2G39830 (0) | DAR2|DA1-related protein 2; LRD3|LATERAL ROOT DEVELOPMENT 3 |
| CRO_T019657 | AT2G19160 (6.00E-149) | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| CRO_T019705 | AT1G17940 (8.00E-174) | Endosomal targeting BRO1-like domain-containing protein |
| CRO_T020522 | AT5G43490 (1.00E-16) | unknown protein |
| CRO_T021780 | AT1G27940 (8.00E-26) | ABCB13|ATP-binding cassette B13; PGP13|P-glycoprotein 13 |
| CRO_T031918 | AT5G63380 (2.00E-97) | AMP-dependent synthetase and ligase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000128 | integral component of membrane Vibrio cholerae infection diacylglycerol and triacylglycerol biosynthesis cyclin-dependent protein serine/threonine kinase activity ER retention sequence binding long-chain-alcohol O-fatty-acyltransferase activity Basal transcription factors diacylglycerol O-acyltransferase activity protein retention in ER lumen defense response signaling pathway, resistance gene-independent triglyceride biosynthetic process regulation of cell cycle | details |
| TreatCFM001529 | box H/ACA snoRNP complex oligopeptide transport pseudouridine synthesis Transcription_related, Transcription factor: HSF Ribosome biogenesis in eukaryotes ribosome biogenesis formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001641 | Protein_kinases_phosphatases, PPC:1.5.3: Receptor Like Cytoplasmic Kinase IV glutaminyl-tRNAgln biosynthesis via transamidation Transcription_related, Transcription regulator: LIM homogalacturonan biosynthesis isoflavonoid biosynthesis II pectin biosynthetic process spliceosomal snRNP assembly G-protein coupled receptor signaling pathway oligopeptide transport formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase | details |
| TreatCFM002065 | Peroxisome pseudouridine degradation fatty-acyl-CoA synthase activity jasmonic acid biosynthetic process ribosomal small subunit assembly jasmonic acid biosynthesis Pyrimidine metabolism hydrolase activity, acting on glycosyl bonds cytosolic small ribosomal subunit | details |
| TreatCFM002168 | protein targeting to membrane 5-formyltetrahydrofolate transport methotrexate transport folic acid transport tRNA 3'-trailer cleavage, endonucleolytic methotrexate transporter activity 3'-tRNA processing endoribonuclease activity 5-formyltetrahydrofolate transporter activity vesicle docking vesicle fusion Transcription_related, Transcription factor: B3 Transcription_related, Transcription factor: MYB-related Transcription_related, Transcription factor: bHLH SNARE binding SNAP receptor activity | details |
Expression profiles
 Show details about module gene expression profiling |