TreatCFM001661's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| viral replication complex formation and maintenance | 0.003412919 | GO:0046786 |
| Arginine and proline metabolism | 0.006190471 | KEGG pathway |
| megagametogenesis | 0.006820393 | GO:0009561 |
| amidase activity | 0.008652562 | GO:0004040 |
| carbon-nitrogen ligase activity, with glutamine as amido-N-donor | 0.008652562 | GO:0016884 |
| protein self-association | 0.008652562 | GO:0043621 |
| integral component of chloroplast outer membrane | 0.017987885 | GO:0031359 |
| embryo development ending in seed dormancy | 0.03162604 | GO:0009793 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006497 | AT1G32400 (1.00E-56) | TOM2A|tobamovirus multiplication 2A |
| CRO_T006625 | AT3G51780 (1.00E-15) | ATBAG4|BCL-2-associated athanogene 4 |
| CRO_T007940 | AT3G56990 (0) | EDA7|embryo sac development arrest 7 |
| CRO_T014949 | AT1G70650 (4.00E-58) | Ran BP2/NZF zinc finger-like superfamily protein |
| CRO_T018138 | AT2G22070 (0) | pentatricopeptide (PPR) repeat-containing protein |
| CRO_T029488 | AT1G62050 (4.00E-155) | Ankyrin repeat family protein |
| CRO_T031732 | AT1G63130 (2.00E-27) | Tetratricopeptide repeat (TPR)-like superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000687 | bisbenzylisoquinoline alkaloid biosynthesis magnoflorine biosynthesis nuclear outer membrane-endoplasmic reticulum membrane network AP-3 adaptor complex detoxification of copper ion copper ion export hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | details |
| TreatCFM001985 | L-arginine degradation I (arginase pathway) L-arginine degradation VI (arginase 2 pathway) L-Nδ-acetylornithine biosynthesis urea cycle integral component of chloroplast outer membrane amidase activity arginase activity carbon-nitrogen ligase activity, with glutamine as amido-N-donor Arginine and proline metabolism Transcription_related, Transcription factor: ERF protein processing Biosynthesis of amino acids | details |
| TreatCFM002043 | adenosine ribonucleotides de novo biosynthesis mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) ATP synthesis coupled proton transport proton-transporting ATP synthase activity, rotational mechanism proton-transporting ATPase activity, rotational mechanism Mismatch repair SNARE interactions in vesicular transport | details |
Expression profiles
 Show details about module gene expression profiling |