TreatCFM001664's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription regulator: SWI/SNF-BAF60b | 0.007440429 | TF family |
| justicidin B biosynthesis | 0.008616954 | plantCyc |
| matairesinol biosynthesis | 0.009755496 | plantCyc |
| xyloglucan biosynthesis | 0.009755496 | plantCyc |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.010828524 | cazy family |
| sesamin biosynthesis | 0.013325527 | plantCyc |
| plastoglobule | 0.014246921 | GO:0010287 |
| guiding stereospecific synthesis activity | 0.017046448 | GO:0042349 |
| regulation of catalytic activity | 0.029178417 | GO:0050790 |
| translational initiation | 0.029178417 | GO:0006413 |
| phenylpropanoid biosynthetic process | 0.029178417 | GO:0009699 |
| translation initiation factor activity | 0.04407398 | GO:0003743 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000293 | AT1G63450 (1.00E-64) | RHS8|root hair specific 8; XUT1|XYLOGLUCAN-SPECIFIC GALACTURONOSYLTRANSFERASE 1 |
| CRO_T002911 | AT2G36410 (1.00E-53) | Family of unknown function (DUF662) |
| CRO_T014466 | AT1G71350 (0) | eukaryotic translation initiation factor SUI1 family protein |
| CRO_T020162 | AT2G36960 (2.00E-34) | TKI1|TSL-kinase interacting protein 1 |
| CRO_T021122 | AT5G08740 (2.00E-149) | NDC1|NAD(P)H dehydrogenase C1 |
| CRO_T026183 | AT5G23950 (1.00E-16) | Calcium-dependent lipid-binding (CaLB domain) family protein |
| CRO_T029540 | AT1G22900 (4.00E-13) | Disease resistance-responsive (dirigent-like protein) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000392 | translational initiation translation initiation factor activity viral replication complex formation and maintenance xyloglucan biosynthesis Transcription_related, Transcription regulator: SWI/SNF-BAF60b formation of glycosidic bonds, GlycosylTransferases: GTnc Ribosome biogenesis in eukaryotes ribosome biogenesis plant-type vacuole membrane GTPase activity | details |
| TreatCFM001108 | translation initiation factor activity xyloglucan biosynthesis osmosensor activity histidine phosphotransfer kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: Orphans stomatal complex patterning DNA-dependent ATPase activity phosphorelay sensor kinase activity damaged DNA binding eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic 43S preinitiation complex seed maturation response to osmotic stress regulation of translational initiation response to water deprivation phosphorelay signal transduction system signal transduction by protein phosphorylation formation of translation preinitiation complex translational initiation DNA repair helicase activity | details |
| TreatCFM001663 | Transcription_related, Transcription regulator: LIM FAD binding plastoglobule oxidation-reduction process secondary metabolite biosynthetic process | details |
| TreatCFM001841 | Transcription_related, Transcription regulator: LIM imidazoleglycerol-phosphate dehydratase activity L-histidine biosynthesis plant sterol biosynthesis histidine biosynthetic process anion transport FAD binding Steroid biosynthesis plastoglobule Biosynthesis of amino acids transmembrane transporter activity | details |
| TreatCFM001861 | post-embryonic root development ether hydrolase activity Adherens junction xyloglucan biosynthesis PPAR signaling pathway MAPK signaling pathway - yeast protein domain specific binding formation of glycosidic bonds, GlycosylTransferases: GTnc Ubiquitin_Proteasome_system, E2: UBC | details |
Expression profiles
 Show details about module gene expression profiling |