TreatCFM001681's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E3: HECT | 0.006378735 | ubs family |
| m7G(5')pppN diphosphatase activity | 0.009029289 | GO:0050072 |
| Ino80 complex | 0.010339733 | GO:0031011 |
| mitochondrial respiratory chain complex I | 0.012546116 | GO:0005747 |
| RNA binding | 0.012568196 | GO:0003723 |
| chromatin remodeling | 0.015627901 | GO:0006338 |
| deadenylation-dependent decapping of nuclear-transcribed mRNA | 0.015627901 | GO:0000290 |
| MicroRNAs in cancer | 0.01919385 | KEGG pathway |
| ribonuclease III activity | 0.019547565 | GO:0004525 |
| Peroxisome | 0.025060736 | KEGG pathway |
| RNA phosphodiester bond hydrolysis, endonucleolytic | 0.026876962 | GO:0090502 |
| manganese ion binding | 0.030417611 | GO:0030145 |
| RNA degradation | 0.034125188 | KEGG pathway |
| Ubiquitin mediated proteolysis | 0.034125188 | KEGG pathway |
| RNA processing | 0.035700344 | GO:0006396 |
| helicase activity | 0.04767525 | GO:0004386 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005488 | AT4G38495 (4.00E-46) | |
| CRO_T011790 | AT5G47570 (2.00E-43) | unknown protein |
| CRO_T020345 | AT5G55840 (0) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T027815 | AT1G01040 (0) | ASU1|ABNORMAL SUSPENSOR 1; ATDCL1|DICER-LIKE 1; CAF|CARPEL FACTORY; EMB60|EMBRYO DEFECTIVE 60; EMB76|EMBRYO DEFECTIVE 76; SIN1|SHORT INTEGUMENTS 1; SUS1|SUSPENSOR 1 |
| CRO_T029053 | AT5G13570 (9.00E-112) | DCP2|decapping 2; ITS1|INCREASED TRANSGENE SILENCING 1; TDT|TRIDENT |
| CRO_T032520 | AT4G04470 (1.00E-16) | PMP22|Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
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Expression profiles
 Show details about module gene expression profiling |