TreatCFM001771's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 0.008096328 | GO:0004365 |
| glucose metabolic process | 0.010112188 | GO:0006006 |
| protein import into mitochondrial outer membrane | 0.010112188 | GO:0045040 |
| SRP-dependent cotranslational protein targeting to membrane | 0.010112188 | GO:0006614 |
| mitochondrial outer membrane translocase complex | 0.012142698 | GO:0005742 |
| gluconeogenesis I | 0.019505234 | plantCyc |
| glycolysis I (from glucose 6-phosphate) | 0.019505234 | plantCyc |
| glycolysis IV (plant cytosol) | 0.019505234 | plantCyc |
| sucrose biosynthesis I (from photosynthesis) | 0.019505234 | plantCyc |
| protein tyrosine phosphatase activity | 0.020216906 | GO:0004725 |
| cell division | 0.021696274 | GO:0051301 |
| NADP binding | 0.030939765 | GO:0050661 |
| NAD binding | 0.033244724 | GO:0051287 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008898 | AT3G27080 (2.00E-50) | TOM20-3|translocase of outer membrane 20 kDa subunit 3 |
| CRO_T015859 | AT3G62010 (3.00E-13) | unknown protein |
| CRO_T016741 | AT2G45770 (1.00E-84) | FRD4|FERRIC CHELATE REDUCTASE DEFECTIVE 4 |
| CRO_T018827 | AT5G09380 (4.00E-46) | RNA polymerase III RPC4 |
| CRO_T020229 | AT3G52190 (1.00E-17) | PHF1|phosphate transporter traffic facilitator1 |
| CRO_T021712 | AT1G13440 (1.00E-141) | GAPC-2|GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C-2; GAPC2|glyceraldehyde-3-phosphate dehydrogenase C2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001770 | auxin binding proline-tRNA ligase activity inositol hexakisphosphate binding glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity auxin receptor activity Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase regulation of photosynthesis prolyl-tRNA aminoacylation Transcription_related, Transcription regulator: GNAT pollen maturation stamen development plant ovule development seed development glucose metabolic process lateral root formation embryo sac development diacylglycerol and triacylglycerol biosynthesis gluconeogenesis I glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) sucrose biosynthesis I (from photosynthesis) SCF ubiquitin ligase complex auxin-activated signaling pathway NADP binding | details |
| TreatCFM001879 | protein import into mitochondrial outer membrane Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) mitochondrial outer membrane translocase complex intracellular signal transduction | details |
| TreatCFM001880 | SRP-dependent cotranslational protein targeting to membrane transferase activity, transferring alkyl or aryl (other than methyl) groups protein tyrosine phosphatase activity cell division Protein export Terpenoid backbone biosynthesis | details |
| TreatCFM002173 | ATP-dependent chromatin remodeling organ boundary specification between lateral organs and the meristem regulation of gene expression, epigenetic Transcription_related, Transcription regulator: SNF2 pre-mRNA branch point binding mRNA splicing, via spliceosome protein tyrosine phosphatase activity DNA-dependent ATPase activity chromatin binding oxidoreductase activity, acting on CH-OH group of donors | details |
Expression profiles
 Show details about module gene expression profiling |