TreatCFM001797's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: SRS | 0.002659181 | TF family |
| Transcription_related, Transcription regulator: SWI/SNF-BAF60b | 0.003189368 | TF family |
| Golgi transport complex | 0.007440758 | GO:0017119 |
| Golgi vesicle prefusion complex stabilization | 0.008093936 | GO:0048213 |
| retrograde transport, vesicle recycling within Golgi | 0.008093936 | GO:0000301 |
| retrograde vesicle-mediated transport, Golgi to ER | 0.00960374 | GO:0006890 |
| Golgi organization | 0.00960374 | GO:0007030 |
| electron carrier activity | 0.016030198 | GO:0009055 |
| response to auxin | 0.020172146 | GO:0009733 |
| plastid | 0.025094818 | GO:0009536 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005468 | AT2G35290 (2.00E-25) | SAUR79|SMALL AUXIN UPREGULATED RNA 79 |
| CRO_T013942 | AT4G19190 (1.00E-129) | zinc knuckle (CCHC-type) family protein |
| CRO_T017801 | AT2G42610 (1.00E-66) | LSH10|LIGHT SENSITIVE HYPOCOTYLS 10 |
| CRO_T019896 | AT5G26330 (5.00E-17) | Cupredoxin superfamily protein |
| CRO_T024466 | AT1G19790 (2.00E-19) | SRS7|SHI-related sequence 7 |
| CRO_T030863 | AT2G35795 (2.00E-38) | Chaperone DnaJ-domain superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000888 | Transcription_related, Transcription factor: SRS Transcription_related, Transcription regulator: SWI/SNF-BAF60b Golgi vesicle prefusion complex stabilization retrograde transport, vesicle recycling within Golgi Golgi organization retrograde vesicle-mediated transport, Golgi to ER Golgi transport complex plastid | details |
Expression profiles
 Show details about module gene expression profiling |