TreatCFM001810's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Phagosome | 0.002480143 | KEGG pathway |
| mitochondrial transport | 0.011805226 | GO:0006839 |
| fatty acid β-oxidation II (peroxisome) | 0.015891692 | plantCyc |
| unsaturated, even numbered fatty acid β-oxidation | 0.015891692 | plantCyc |
| mitochondrial membrane | 0.021276655 | GO:0031966 |
| microtubule-based process | 0.023579074 | GO:0007017 |
| very long chain fatty acid biosynthesis II | 0.024888695 | plantCyc |
| chloroplast | 0.041764926 | GO:0009507 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005198 | AT3G61650 (3.00E-32) | TUBG1|gamma-tubulin |
| CRO_T008588 | AT2G22650 (1.00E-136) | FAD-dependent oxidoreductase family protein |
| CRO_T015426 | AT1G28140 (2.00E-83) | unknown protein |
| CRO_T016281 | AT3G51870 (1.00E-12) | Mitochondrial substrate carrier family protein |
| CRO_T022393 | AT5G66420 (0) | |
| CRO_T024988 | AT1G54520 (6.00E-101) | unknown protein |
| CRO_T025661 | AT1G35710 (0) | Protein kinase family protein with leucine-rich repeat domain |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001051 | 3-deoxy-7-phosphoheptulonate synthase activity UMP kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc nucleotide phosphorylation pyrimidine nucleotide biosynthetic process aromatic amino acid family biosynthetic process RNA metabolic process 3-dehydroquinate biosynthesis I UTP and CTP de novo biosynthesis xylan biosynthesis cellulose biosynthesis pyrimidine ribonucleotides interconversion Pyrimidine metabolism Biosynthesis of amino acids | details |
| TreatCFM001859 | tetrapyrrole biosynthesis I (from glutamate) hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Phagosome microtubule-based process structural constituent of cytoskeleton beta-galactosidase activity response to stress | details |
| TreatCFM001883 | allantoin degradation to ureidoglycolate II (ammonia producing) tetrapyrrole biosynthesis I (from glutamate) GTP binding hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines metal ion transmembrane transporter activity protein tyrosine phosphatase activity structural constituent of cytoskeleton cellular nitrogen compound catabolic process Phagosome organic substance metabolic process microtubule-based process peptidyl-tyrosine dephosphorylation unfolded protein binding primary metabolic process metal ion transport response to stress | details |
Expression profiles
 Show details about module gene expression profiling |