TreatCFM001825's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase | 0.005131975 | kinase family |
| Elongator holoenzyme complex | 0.007386615 | GO:0033588 |
| diacylglycerol and triacylglycerol biosynthesis | 0.008482389 | plantCyc |
| cytoplasm | 0.024649171 | GO:0005737 |
| poly(A) RNA binding | 0.026011885 | GO:0044822 |
| calmodulin-dependent protein kinase activity | 0.026011885 | GO:0004683 |
| calcium-dependent protein serine/threonine kinase activity | 0.026011885 | GO:0009931 |
| regulation of biological process | 0.028560275 | GO:0050789 |
| RNA processing | 0.028560275 | GO:0006396 |
| peptidyl-serine phosphorylation | 0.028560275 | GO:0018105 |
| protein autophosphorylation | 0.028560275 | GO:0046777 |
| abscisic acid-activated signaling pathway | 0.028560275 | GO:0009738 |
| Spliceosome | 0.029426413 | KEGG pathway |
| ATP-dependent RNA helicase activity | 0.035276992 | GO:0004004 |
| calmodulin binding | 0.035276992 | GO:0005516 |
| nucleus | 0.037840218 | GO:0005634 |
| intracellular signal transduction | 0.038416495 | GO:0035556 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000809 | AT1G15740 (2.00E-152) | Leucine-rich repeat family protein |
| CRO_T003931 | AT1G12580 (3.00E-150) | PEPKR1|phosphoenolpyruvate carboxylase-related kinase 1 |
| CRO_T004670 | AT2G35340 (0) | MEE29|maternal effect embryo arrest 29 |
| CRO_T019198 | AT4G10090 (3.00E-59) | ELP6|elongator protein 6 |
| CRO_T022078 | AT5G11530 (1.00E-05) | EMF1|embryonic flower 1 |
| CRO_T023100 | AT1G48300 (1.00E-21) | DGAT3|diacylglycerol acyltransferase 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001770 | auxin binding proline-tRNA ligase activity inositol hexakisphosphate binding glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity auxin receptor activity Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase regulation of photosynthesis prolyl-tRNA aminoacylation Transcription_related, Transcription regulator: GNAT pollen maturation stamen development plant ovule development seed development glucose metabolic process lateral root formation embryo sac development diacylglycerol and triacylglycerol biosynthesis gluconeogenesis I glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) sucrose biosynthesis I (from photosynthesis) SCF ubiquitin ligase complex auxin-activated signaling pathway NADP binding | details |
Expression profiles
 Show details about module gene expression profiling |