TreatCFM001838's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| photoinhibition | 0.002659181 | GO:0010205 |
| actin binding | 0.019631472 | GO:0003779 |
| serine-type endopeptidase activity | 0.025357101 | GO:0004252 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008098 | AT4G10430 (5.00E-66) | TMPIT-like protein |
| CRO_T009452 | AT3G03380 (2.00E-77) | DEG7|degradation of periplasmic proteins 7; DegP7|DegP protease 7 |
| CRO_T010207 | AT4G02710 (5.00E-33) | NET1C|Networked 1C |
| CRO_T024983 | AT3G15390 (4.00E-05) | SDE5|silencing defective 5 |
| CRO_T029538 | AT1G64140 (1.00E-176) | |
| CRO_T029543 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001182 | carboxypeptidase activity benzoate biosynthesis I (CoA-dependent, β-oxidative) | details |
| TreatCFM001969 | Autophagy - yeast condensed chromosome outer kinetochore chromosome segregation spindle microtubule phragmoplast cell division vesicle-mediated transport | details |
| TreatCFM002069 | heterochromatin maintenance leaf pavement cell development regulation of mRNA polyadenylation positive regulation of chromatin silencing positive regulation of histone H3-K27 methylation regulation of DNA methylation positive regulation of histone H3-K9 dimethylation Proteasome positive regulation of RNA polymerase II transcriptional preinitiation complex assembly positive regulation of flower development positive regulation of proteasomal protein catabolic process regulation of leaf development formation of glycosidic bonds, GlycosylTransferases: GTnc cytosolic proteasome complex nuclear proteasome complex proteasome regulatory particle, base subcomplex ER-associated ubiquitin-dependent protein catabolic process vegetative to reproductive phase transition of meristem defense response to fungus TBP-class protein binding proteasome-activating ATPase activity single-organism process chloroplast thylakoid | details |
| TreatCFM002107 | RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly Transcription_related, Transcription regulator: MED6 RNA polymerase II transcriptional preinitiation complex assembly core mediator complex benzoate biosynthesis I (CoA-dependent, β-oxidative) regulation of transcription from RNA polymerase II promoter mediator complex | details |
Expression profiles
 Show details about module gene expression profiling |