TreatCFM001865's detailed annotation
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
Function Annotation | FDR | Gene Ontolog |
---|---|---|
costunolide biosynthesis | 0.001949202 | plantCyc |
Transcription_related, Transcription factor: bHLH | 0.014279181 | TF family |
oligopeptide transport | 0.014614695 | GO:0006857 |
carbohydrate transport | 0.015084009 | GO:0008643 |
response to stress | 0.018454594 | GO:0006950 |
Spliceosome | 0.029426413 | KEGG pathway |
Module member annotation
Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
---|---|---|
CRO_T001106 | AT3G19550 (7.00E-13) | unknown protein |
CRO_T001845 | AT3G23830 (5.00E-21) | GRP4|glycine-rich RNA-binding protein 4 |
CRO_T004992 | AT2G37900 (0) | Major facilitator superfamily protein |
CRO_T011779 | AT3G26330 (4.00E-62) | CYP71B37|cytochrome P450, family 71, subfamily B, polypeptide 37 |
CRO_T012750 | AT4G00870 (3.00E-29) | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
CRO_T013904 | AT5G23660 (2.00E-75) | MTN3|homolog of Medicago truncatula MTN3 |
Direct connection functional modules
Module ID | Function Annotation | Overlap condition |
---|---|---|
TreatCFM000983 | ABC transporters Transcription_related, Transcription factor: bHLH Transcription_related, Transcription factor: G2-like Transcription_related, Transcription factor: HB | details |
TreatCFM001195 | cutin biosynthesis Spliceosome | details |
TreatCFM001312 | Transcription_related, Transcription factor: TCP Spliceosome | details |
TreatCFM001511 | L-isoleucine biosynthesis I (from threonine) costunolide biosynthesis neutral amino acid transport tryptophan transport aspartate transport L-threonine ammonia-lyase activity acidic amino acid transmembrane transporter activity neutral amino acid transmembrane transporter activity isoleucine biosynthetic process cellular amino acid biosynthetic process ABC transporters Transcription_related, Transcription factor: bHLH Transcription_related, Transcription factor: HB | details |
TreatCFM001956 | Transcription_related, Transcription factor: C2C2-YABBY specification of organ position inflorescence meristem growth abaxial cell fate specification specification of floral organ identity cutin biosynthesis fruit development translation release factor activity translational termination meristem structural organization regulation of flower development NAD+ ADP-ribosyltransferase activity Transcription_related, Transcription factor: C2H2 Spliceosome oxidoreductase activity, acting on CH-OH group of donors | details |
Expression profiles
Show details about module gene expression profiling |