TreatCFM001865's detailed annotation
Protein:
Yellow color--query protein
Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein
Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
costunolide biosynthesis0.001949202plantCyc
Transcription_related, Transcription factor: bHLH0.014279181TF family
oligopeptide transport0.014614695GO:0006857
carbohydrate transport0.015084009GO:0008643
response to stress0.018454594GO:0006950
Spliceosome 0.029426413KEGG pathway

Module member annotation

Gene IDOrtholog in Arabidopsis (Blast E-value)Annotation in Arabidopsis
CRO_T001106AT3G19550 (7.00E-13)unknown protein
CRO_T001845AT3G23830 (5.00E-21)GRP4|glycine-rich RNA-binding protein 4
CRO_T004992AT2G37900 (0)Major facilitator superfamily protein
CRO_T011779AT3G26330 (4.00E-62)CYP71B37|cytochrome P450, family 71, subfamily B, polypeptide 37
CRO_T012750AT4G00870 (3.00E-29)basic helix-loop-helix (bHLH) DNA-binding superfamily protein
CRO_T013904AT5G23660 (2.00E-75)MTN3|homolog of Medicago truncatula MTN3

Direct connection functional modules

Module IDFunction AnnotationOverlap condition
TreatCFM000983ABC transporters
Transcription_related, Transcription factor: bHLH
Transcription_related, Transcription factor: G2-like
Transcription_related, Transcription factor: HB
details
TreatCFM001195cutin biosynthesis
Spliceosome
details
TreatCFM001312Transcription_related, Transcription factor: TCP
Spliceosome
details
TreatCFM001511L-isoleucine biosynthesis I (from threonine)
costunolide biosynthesis
neutral amino acid transport
tryptophan transport
aspartate transport
L-threonine ammonia-lyase activity
acidic amino acid transmembrane transporter activity
neutral amino acid transmembrane transporter activity
isoleucine biosynthetic process
cellular amino acid biosynthetic process
ABC transporters
Transcription_related, Transcription factor: bHLH
Transcription_related, Transcription factor: HB
details
TreatCFM001956Transcription_related, Transcription factor: C2C2-YABBY
specification of organ position
inflorescence meristem growth
abaxial cell fate specification
specification of floral organ identity
cutin biosynthesis
fruit development
translation release factor activity
translational termination
meristem structural organization
regulation of flower development
NAD+ ADP-ribosyltransferase activity
Transcription_related, Transcription factor: C2H2
Spliceosome
oxidoreductase activity, acting on CH-OH group of donors
details

Expression profiles


Show details about module gene expression profiling
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