TreatCFM002036's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Carbon metabolism | 0.000945479 | KEGG pathway |
| pyruvate decarboxylation to acetyl CoA | 0.011071739 | plantCyc |
| spermine and spermidine degradation III | 0.011071739 | plantCyc |
| fructose 6-phosphate metabolic process | 0.011792672 | GO:0006002 |
| acetyl-CoA biosynthetic process from pyruvate | 0.011792672 | GO:0006086 |
| glycolytic process through fructose-6-phosphate | 0.011792672 | GO:0061615 |
| 6-phosphofructokinase activity | 0.013025176 | GO:0003872 |
| pyruvate dehydrogenase (acetyl-transferring) activity | 0.013025176 | GO:0004739 |
| Transcription_related, Transcription factor: HB | 0.013227325 | TF family |
| glycolysis I (from glucose 6-phosphate) | 0.019505234 | plantCyc |
| glycolysis IV (plant cytosol) | 0.019505234 | plantCyc |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003615 | AT4G03250 (2.00E-55) | Homeodomain-like superfamily protein |
| CRO_T010879 | AT1G62830 (6.00E-76) | ATLSD1|ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE; LDL1|LSD1-like 1; LSD1|LYSINE-SPECIFIC HISTONE DEMETHYLASE |
| CRO_T016761 | AT5G50850 (0) | MAB1|MACCI-BOU |
| CRO_T018396 | AT2G29940 (1.00E-18) | ABCG31|ATP-binding cassette G31; ATPDR3|PLEIOTROPIC DRUG RESISTANCE 3 |
| CRO_T021051 | AT1G57620 (5.00E-27) | CYB|CYTOPLASMIC BODIES |
| CRO_T021229 | AT2G19790 (3.00E-30) | SNARE-like superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001976 | pyruvate decarboxylation to acetyl CoA pyruvate dehydrogenase (acetyl-transferring) activity acetyl-CoA biosynthetic process from pyruvate Carbon metabolism photoreceptor activity entrainment of circadian clock response to UV-B anatomical structure development single-organism developmental process Transcription_related, Transcription factor: HB chromatin chromatin binding protein homodimerization activity regulation of cellular process signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |