Gene detail

Detail information of MD08G1220300 Annotation

Gene ID	Annotation
MD08G1220300	--

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0061	4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] 4-hydroxybenzoate nonaprenyltransferase activity

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD08G1220300	mRNA	Chr08	28309498	28315862	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
--	--	--	--

Gene Ontology

GO term	Description	Category
GO:0003676	nucleic acid binding	molecular_function
GO:0008270	zinc ion binding	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00098.19	zf-CCHC	120	136	4.50E-07

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.297557
SRR5252888	dormant buds	no	dormant buds(0 month)	1.14528
SRR5252889	dormant buds	no	dormant buds(0 month)	1.83218
SRR5252886	dormant buds	no	dormant buds(1 months)	0.831346
SRR5252887	dormant buds	no	dormant buds(1 months)	1.61985
SRR5252884	dormant buds	no	dormant buds(2 months)	0.235173
SRR5252882	dormant buds	no	dormant buds(3 months)	1.0614
SRR5252883	dormant buds	no	dormant buds(3 months)	0.514033
SRR5252880	dormant buds	no	dormant buds(4 months)	1.05928
SRR5252881	dormant buds	no	dormant buds(4 months)	1.04512
SRR5252878	bud break	no	bud break	2.34462
SRR5252879	bud break	no	bud break	1.29996
SRR3744766	flower	no	mature	0.815105
SRR3744767	flower	no	mature	0.821561
SRR3744768	flower	no	mature	0.739298
SRR6308190	stigmas	no	open flowers	0.187106
SRR6308181	styles	no	open flowers	0.160883
SRR6308188	filaments	no	open flowers	0.241698
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	19.8163
SRR6308192	pollen	no	open flowers	127.676
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	0.300233
SRR6308193	receptacles	no	open flowers	0
SRR6308189	ovaries	no	open flowers	0.129712
SRR3384922	fruit	no	1 week after full bloom	0
SRR3384921	fruit	no	2 week after full bloom	0
SRR3384920	fruit	no	3 week after full bloom	0.157846
SRR3384919	fruit	no	4 week after full bloom	0.145826
SRR3384923	fruit	no	5 week after full bloom	0.184906
SRR3384918	fruit	no	6 week after full bloom	0.0514597
SRR3384917	fruit	no	8 week after full bloom	0.222884
SRR3384916	fruit	no	10 week after full bloom	0.337802
SRR3384915	fruit	no	12 week after full bloom	0.685172
SRR3384914	fruit	no	14 week after full bloom	0.332259
SRR3384913	fruit	no	16 week after full bloom	0.130449
SRR3384912	fruit	no	18 week after full bloom	0.428468
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0.275797
SRR768128	whole fruit	no	25 days post anthesis	0.265723
SRR768129	whole fruit	no	35 days post anthesis	0
SRR768130	whole fruit	no	60 days post anthesis	0.122309
SRR768131	whole fruit	no	87 days post anthesis	0.0920631
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0.311846
SRR5405143	ripe fruit peel	no	mature	0.728477
SRR6320572	ripe fruit peel	no	mature	0.270265
SRR7403504	fruit	uninfected	mature	0.245177
SRR7403506	fruit	uninfected	mature	0.323742
SRR7403507	fruit	uninfected	mature	0.461266
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0.117544
SRR7403508	fruit	infected with penicillium expansum	mature	0.0847367
SRR7403502	fruit	infected with penicillium expansum	mature	0.0655138
SRR7403503	fruit	infected with penicillium expansum	mature	0.219521
SRR7403505	fruit	infected with penicillium expansum	mature	0.0657743
SRR1613973	Central seeds	no	20DAPF	0
SRR1613974	Central seeds	no	20DAPF	0.0113144
SRR1613975	Central seeds	no	20DAPF	0
SRR1613976	Lateral seeds	no	20DAPF	0
SRR1613977	Lateral seeds	no	20DAPF	0
SRR1613978	Lateral seeds	no	20DAPF	0.0143517
SRR3744786	stem	no	mature	0.279546
SRR3744787	stem	no	mature	0.377156
SRR3744772	stem	no	mature	0.351089
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.098153
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.085188
SRR1089478	leaf	Virus-free	plantlets	0
SRR1089477	leaf	ASGV-infected	plantlets	0
SRR767660	leaf	uninfected	fully developed	0.968322
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	3.0332
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	1.3899
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	1.34684
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	8.67696
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0.813437
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	3.56681
SRR6308182	young leaf	no	immature leaves	0.0670268
SRR3744769	leaf	no	mature	0
SRR3744770	leaf	no	mature	0.0546867
SRR3744771	leaf	no	mature	0.134662
SRR5405145	leaf	no	mature	0.188889
SRR6320561	leaf	no	mature	0