| Gene ID | Annotation |
|---|---|
| MD11G1304300 | tetratricopeptide repeat (TPR)-containing protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0488 | raffinose synthase [EC:2.4.1.82] GH36 GSK3/Shaggy Like Protein Kinase Family amine transmembrane transporter activity raffinose alpha-galactosidase activity raffinose catabolic process photosystem II stabilization photosystem II oxygen evolving complex assembly |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD11G1304300 | mRNA | Chr11 | 41939753 | 41943238 | + |
| CDS: |
| MD11G1304300 |
| Protein: |
| MD11G1304300 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G02910.1 | 1 | LPA1|LOW PSII ACCUMULATION1 |
| Prunus persica | Prupe.8G257900.1.p | 1 | tetratricopeptide repeat (TPR)-containing protein |
| Pyrus communis | PCP044555.1 | 1 | - |
| Rosa multiflora | Rmu_sc0006269.1_g000009.1 | 1 | - |
| Rubus occidentalis | Ro02_G07042 | 1 | - |
| Fragaria vesca | mrna10567.1 | 1 | tetratricopeptide repeat (TPR)-containing protein |
| Vitis vinifera | GSVIVT01027972001 | 1 | tetratricopeptide repeat (TPR)-containing protein |
| Populus trichocarpa | Potri.002G206300.1 | 1 | tetratricopeptide repeat (TPR)-containing protein |
| Nicotiana benthamiana | Niben101Scf06628g01002.1 | 1 | tetratricopeptide repeat (TPR)-containing protein LENGTH=453 |
| Nicotiana benthamiana | Niben101Scf11380g03009.1 | 0.897 | tetratricopeptide repeat (TPR)-containing protein LENGTH=453 |
| Oryza sativa | LOC_Os01g25600.1 | 1 | "tetratricopeptide repeat domain containing protein, expressed" |
| Zea mays | GRMZM2G383154_P01 | 1 | tetratricopeptide repeat (TPR)-containing protein |
| GO term | Description | Category |
|---|---|---|
| GO:0005515 | protein binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |