| Gene ID | Annotation |
|---|---|
| MD13G1278500 | Chitinase family protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0536 | calcium ion transport Golgi organization response to desiccation regulation of carbohydrate biosynthetic process cell wall biogenesis pattern specification process polysaccharide binding chitinase activity acetyl-CoA metabolic process sterol biosynthetic process cysteine biosynthetic process response to salt stress regulation of salicylic acid metabolic process cell tip growth auxin polar transport multidimensional cell growth brassinosteroid biosynthetic process GH19 hyperosmotic response anthocyanin accumulation in tissues in response to UV light cell wall macromolecule catabolic process response to fructose starch metabolic process regulation of meristem growth root hair elongation water transport response to cytokinin pentacyclic triterpenoid biosynthetic process purine nucleobase catabolic process superoxide anion generation xanthine metabolic process next to BRCA1 gene 1 protein Delta14-sterol reductase [EC:1.3.1.70] Delta7-sterol 5-desaturase [EC:1.14.19.20] C-5 sterol desaturase activity delta14-sterol reductase activity xanthine dehydrogenase activity glycolytic process cellular aldehyde metabolic process xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2] aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] cytochrome b-561 [EC:1.16.5.1] |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD13G1278500 | mRNA | Chr13 | 38826922 | 38829485 | + |
| CDS: |
| MD13G1278500 |
| Protein: |
| MD13G1278500 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH19 |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G05850.1 | 1 | ATCTL1;CTL1;ELP;ELP1;ERH2;HOT2;POM1|CHITINASE-LIKE PROTEIN 1;ECTOPIC DEPOSITION OF LIGNIN IN PITH;ECTOPIC DEPOSITION OF LIGNIN IN PITH 1;ECTOPIC ROOT HAIR 2;SENSITIVE TO HOT TEMPERATURES 2;POM-POM1 |
| Prunus persica | Prupe.1G179800.1.p | 1 | Chitinase family protein |
| Rosa multiflora | Rmu_sc0000647.1_g000016.1 | 1 | - |
| Rosa multiflora | Rmu_sc0001616.1_g000011.1 | 1 | - |
| Rubus occidentalis | Ro04_G17511 | 1 | - |
| Fragaria vesca | mrna22465.1 | 1 | Chitinase family protein |
| Populus trichocarpa | Potri.014G146600.3 | 1 | Chitinase family protein |
| Nicotiana benthamiana | Niben101Scf00270g01014.1 | 1 | Chitinase-like protein 1 |
| Oryza sativa | LOC_Os09g32080.2 | 1 | "CHIT13 - Chitinase family protein precursor, expressed" |
| Zea mays | GRMZM2G168364_P01 | 1 | Endochitinase A2; |
| GO term | Description | Category |
|---|---|---|
| GO:0016998 | cell wall macromolecule catabolic process | biological_process |
| GO:0006032 | chitin catabolic process | biological_process |
| GO:0004568 | chitinase activity | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00182.15 | Glyco_hydro_19 | 134 | 361 | 8.10E-63 |
 |