PH01000001G0880's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G21560 : 3.00E-12
Blast annotation: -
2.Location
Scaffold: PH01000001
Strand: +
| Region | Start | End |
| gene | 635450 | 648134 |
| mRNA | 635450 | 648134 |
| exon | 635450 | 635569 |
| exon | 636080 | 636180 |
| exon | 636467 | 636589 |
| exon | 639300 | 639304 |
| exon | 640030 | 640777 |
| exon | 640855 | 641103 |
| exon | 645100 | 645337 |
| exon | 647204 | 647280 |
| exon | 647683 | 648134 |
| CDS | 635566 | 635569 |
| CDS | 636080 | 636180 |
| CDS | 636467 | 636589 |
| CDS | 639300 | 639304 |
| CDS | 640030 | 640777 |
| CDS | 640855 | 641103 |
| CDS | 645100 | 645337 |
| CDS | 647204 | 647280 |
| CDS | 647683 | 647775 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.