PH01000001G2850's details annotation
1.Annotation
ICBR annotation: ferredoxin-thioredoxin reductase, variable chain, putative, expressed
Blast result AT5G23440 : 2.60E-23
Blast annotation: ferredoxin/thioredoxin reductase subunit A (variable subunit) 1
2.Location
Scaffold: PH01000001
Strand: +
| Region | Start | End |
| gene | 1883138 | 1885377 |
| mRNA | 1883138 | 1885377 |
| exon | 1883138 | 1885377 |
| CDS | 1883371 | 1883829 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02941.14 | FeThRed_A | 73 | 145 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0009107 | lipoate biosynthetic process |
| GO:0015979 | photosynthesis |
| GO:0016992 | lipoate synthase activity |
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.