Gene details

Annotation of co-expression genes

PH01000004G0500's details annotation

1.Annotation

ICBR annotation: POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed

Blast result AT5G67100 : 0.00E+00
Blast annotation: DNA-directed DNA polymerases

2.Location

Scaffold: PH01000004
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000682	DNA_replication Ino80_complex DNA_replication,_Okazaki_fragment_processing nucleoside binding, single-stranded_DNA-dependent_ATPase_activity 5'-flap_endonuclease_activity ATP-dependent_5'-3'_DNA_helicase_activity DNA helicase activity, nucleobase-containing compound metabolic process, DNA-directed DNA polymerase activity, DNA_replication

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Purine metabolism	DNA polymerase alpha subunit A [EC:2.7.7.7]	ko00230	K02320
Pyrimidine metabolism	DNA polymerase alpha subunit A [EC:2.7.7.7]	ko00240	K02320
DNA replication	DNA polymerase alpha subunit A [EC:2.7.7.7]	ko03030	K02320

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0001882	nucleoside binding
GO:0003676	nucleic acid binding
GO:0003677	DNA binding
GO:0003887	DNA-directed DNA polymerase activity
GO:0006139	nucleobase-containing compound metabolic process
GO:0006260	DNA replication

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.