PH01000005G1180's details annotation
1.Annotation
ICBR annotation: prefoldin subunit, putative, expressed
Blast result AT3G22480 : 2.20E-45
Blast annotation: prefoldin 2
2.Location
Scaffold: PH01000005
Strand: -
| Region | Start | End |
| gene | 742369 | 745254 |
| mRNA | 742369 | 745254 |
| exon | 742369 | 743329 |
| exon | 743940 | 745254 |
| CDS | 742873 | 743329 |
| CDS | 743940 | 744160 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01920.19 | Prefoldin_2 C | 18 | 119 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006457 | protein folding |
| GO:0016272 | prefoldin complex |
| GO:0051082 | unfolded protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.