PH01000010G0280's details annotation
1.Annotation
ICBR annotation: protein phosphatase 2C, putative, expressed
Blast result AT3G51370 : 4.00E-156
Blast annotation: Protein phosphatase 2C family protein
2.Location
Scaffold: PH01000010
Strand: +
| Region | Start | End |
| gene | 201548 | 206652 |
| mRNA | 201548 | 206652 |
| exon | 201548 | 202818 |
| exon | 203239 | 203606 |
| exon | 204307 | 204543 |
| exon | 205346 | 205498 |
| exon | 205654 | 206652 |
| CDS | 202512 | 202818 |
| CDS | 203239 | 203606 |
| CDS | 204307 | 204543 |
| CDS | 205346 | 205498 |
| CDS | 205654 | 205737 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00481.20 | PP2C | 73 | 320 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0004722 | protein serine/threonine phosphatase activity |
| GO:0006470 | protein dephosphorylation |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.