Gene details

Annotation of co-expression genes

PH01000013G1960's details annotation

1.Annotation

ICBR annotation: MEE34, putative, expressed

Blast result AT5G05780 : 8.00E-162
Blast annotation: RP non-ATPase subunit 8A

2.Location

Scaffold: PH01000013
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000496	cullin-RING ubiquitin ligase complex, ubiquitin protein ligase binding, Pseudo ARR-B Transcription_Regulator(from iTAK) ubiquitin-dependent protein catabolic process, diphosphomevalonate decarboxylase activity, L,L-diaminopimelate_aminotransferase_activity Citrate_cycle_(TCA_cycle) Pyruvate_metabolism
coexpression network	CFinderM000822	protein binding, Proteasome
coexpression network	CFinderM001723	Proteasome proteolysis involved in cellular protein catabolic process, protein catabolic process, proteasome core complex, mRNA_surveillance_pathway

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Proteasome	26S proteasome regulatory subunit N8	ko03051	K03038

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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