PH01000013G2450's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G62370 : 9.00E-125
Blast annotation: heme binding
2.Location
Scaffold: PH01000013
Strand: +
| Region | Start | End |
| gene | 1708222 | 1714025 |
| mRNA | 1708222 | 1714025 |
| exon | 1708222 | 1708895 |
| exon | 1709193 | 1709282 |
| exon | 1710710 | 1710832 |
| exon | 1711071 | 1711225 |
| exon | 1711317 | 1711387 |
| exon | 1711529 | 1711597 |
| exon | 1711985 | 1712085 |
| exon | 1712739 | 1714025 |
| CDS | 1708641 | 1708895 |
| CDS | 1709193 | 1709282 |
| CDS | 1710710 | 1710832 |
| CDS | 1711071 | 1711225 |
| CDS | 1711317 | 1711387 |
| CDS | 1711529 | 1711597 |
| CDS | 1711985 | 1712085 |
| CDS | 1712739 | 1713038 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF09459.9 | EB_dh | 53 | 320 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0020037 | heme binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.