PH01000019G0750's details annotation
1.Annotation
ICBR annotation: nitric oxide synthase 1, putative, expressed
Blast result AT3G47450 : 4.00E-164
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01000019
Strand: +
| Region | Start | End |
| gene | 580868 | 586761 |
| mRNA | 580868 | 586761 |
| exon | 580868 | 581561 |
| exon | 582949 | 583134 |
| exon | 583234 | 583320 |
| exon | 583401 | 583480 |
| exon | 583575 | 583656 |
| exon | 584393 | 584438 |
| exon | 584567 | 584685 |
| exon | 584984 | 585151 |
| exon | 585241 | 585315 |
| exon | 585420 | 585509 |
| exon | 585977 | 586086 |
| exon | 586294 | 586761 |
| CDS | 581304 | 581561 |
| CDS | 582949 | 583134 |
| CDS | 583234 | 583320 |
| CDS | 583401 | 583480 |
| CDS | 583575 | 583656 |
| CDS | 584393 | 584438 |
| CDS | 584567 | 584685 |
| CDS | 584984 | 585151 |
| CDS | 585241 | 585315 |
| CDS | 585420 | 585509 |
| CDS | 585977 | 586086 |
| CDS | 586294 | 586552 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Arginine and proline metabolism | nitric-oxide synthase, plant [EC:1.14.13.39] | ko00330 | K13427 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005525 | GTP binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.