PH01000020G0870's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G78790 : 1.20E-24
Blast annotation: -
2.Location
Scaffold: PH01000020
Strand: -
| Region | Start | End |
| gene | 589492 | 592821 |
| mRNA | 589492 | 592821 |
| exon | 589492 | 589779 |
| exon | 589874 | 589927 |
| exon | 590787 | 590826 |
| exon | 590970 | 591053 |
| exon | 591163 | 592821 |
| CDS | 589676 | 589779 |
| CDS | 589874 | 589927 |
| CDS | 590787 | 590826 |
| CDS | 590970 | 591053 |
| CDS | 591163 | 591201 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF09415.9 | CENP-X | 47 | 106 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.