PH01000025G0290's details annotation
1.Annotation
ICBR annotation: kinesin motor domain containing protein, putative, expressed
Blast result AT3G19050 : 0.00E+00
Blast annotation: phragmoplast orienting kinesin 2
2.Location
Scaffold: PH01000025
Strand: -
| Region | Start | End |
| gene | 236214 | 243882 |
| mRNA | 236214 | 243882 |
| exon | 236214 | 236537 |
| exon | 236663 | 236740 |
| exon | 237103 | 237272 |
| exon | 237769 | 237853 |
| exon | 238640 | 238759 |
| exon | 238854 | 238919 |
| exon | 239008 | 239178 |
| exon | 239270 | 239380 |
| exon | 239486 | 239597 |
| exon | 239684 | 239745 |
| exon | 239823 | 239894 |
| exon | 239999 | 240097 |
| exon | 240181 | 240414 |
| exon | 240502 | 240576 |
| exon | 240665 | 240752 |
| exon | 240831 | 240991 |
| exon | 241095 | 241202 |
| exon | 241294 | 243882 |
| CDS | 236412 | 236537 |
| CDS | 236663 | 236740 |
| CDS | 237103 | 237272 |
| CDS | 237769 | 237853 |
| CDS | 238640 | 238759 |
| CDS | 238854 | 238919 |
| CDS | 239008 | 239178 |
| CDS | 239270 | 239380 |
| CDS | 239486 | 239597 |
| CDS | 239684 | 239745 |
| CDS | 239823 | 239894 |
| CDS | 239999 | 240097 |
| CDS | 240181 | 240414 |
| CDS | 240502 | 240576 |
| CDS | 240665 | 240752 |
| CDS | 240831 | 240991 |
| CDS | 241095 | 241202 |
| CDS | 241294 | 243669 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.