Gene details

Annotation of co-expression genes

PH01000038G0330's details annotation

1.Annotation

ICBR annotation: peptidase, T1 family, putative, expressed

Blast result AT2G05840 : 6.00E-121
Blast annotation: 20S proteasome subunit PAA2

2.Location

Scaffold: PH01000038
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000605	proteasome core complex, alpha-subunit complex, threonine-type endopeptidase activity, proteasome core complex, endopeptidase activity, Proteasome proteolysis involved in cellular protein catabolic process,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Proteasome	20S proteasome subunit alpha 1 [EC:3.4.25.1]	ko03051	K02730

10.Gene Ontology

GO Accession	GO Annotation
GO:0004175	endopeptidase activity
GO:0004298	threonine-type endopeptidase activity
GO:0005839	proteasome core complex
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0019773	proteasome core complex, alpha-subunit complex
GO:0051603	proteolysis involved in cellular protein catabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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