PH01000040G1680's details annotation
1.Annotation
ICBR annotation: hydrolase, alpha/beta fold family domain containing protein, expressed
Blast result AT2G26740 : 1.90E-45
Blast annotation: soluble epoxide hydrolase
2.Location
Scaffold: PH01000040
Strand: +
| Region | Start | End |
| gene | 1087802 | 1093631 |
| mRNA | 1087802 | 1093631 |
| exon | 1087802 | 1088196 |
| exon | 1090128 | 1090526 |
| exon | 1091718 | 1091849 |
| exon | 1093027 | 1093631 |
| CDS | 1087906 | 1088196 |
| CDS | 1090128 | 1090526 |
| CDS | 1091718 | 1091849 |
| CDS | 1093027 | 1093494 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00561.19 | Abhydrolase_1 | 28 | 131 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.