PH01000040G1920's details annotation
1.Annotation
ICBR annotation: domain of unknown function domain containing protein, expressed
Blast result AT5G26740 : 2.00E-134
Blast annotation: Protein of unknown function (DUF300)
2.Location
Scaffold: PH01000040
Strand: +
| Region | Start | End |
| gene | 1234823 | 1239565 |
| mRNA | 1234823 | 1239565 |
| exon | 1234823 | 1235348 |
| exon | 1236373 | 1236446 |
| exon | 1237612 | 1237684 |
| exon | 1238186 | 1238596 |
| exon | 1238703 | 1239565 |
| CDS | 1235196 | 1235348 |
| CDS | 1236373 | 1236446 |
| CDS | 1237612 | 1237684 |
| CDS | 1238186 | 1238596 |
| CDS | 1238703 | 1239020 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000633 | Aminoacyl-tRNA_biosynthesis histone_lysine_methylation |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03619.15 | Solute_trans_a | 10 | 268 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.