Annotation of co-expression genes

PH01000041G0570's details annotation

1.Annotation

ICBR annotation: heavy metal transport/detoxification protein, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000041
Strand: +

RegionStartEnd
gene400255402079
mRNA400255402079
exon400255400421
exon400504400582
exon400692402079
CDS400416400421
CDS400504400582
CDS400692401287

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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