PH01000041G2180's details annotation
1.Annotation
ICBR annotation: molybdopterin biosynthesis protein CNX3, putative, expressed
Blast result AT1G01290 : 2.90E-60
Blast annotation: cofactor of nitrate reductase and xanthine dehydrogenase 3
2.Location
Scaffold: PH01000041
Strand: -
| Region | Start | End |
| gene | 1430608 | 1434897 |
| mRNA | 1430608 | 1434897 |
| exon | 1430608 | 1434897 |
| CDS | 1431099 | 1431671 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01967.20 | MoaC | 47 | 182 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Folate biosynthesis | molybdenum cofactor biosynthesis protein | ko00790 | K03639 |
| Sulfur relay system | molybdenum cofactor biosynthesis protein | ko04122 | K03639 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006777 | Mo-molybdopterin cofactor biosynthetic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.