PH01000048G1450's details annotation
1.Annotation
ICBR annotation: X8 domain containing protein, expressed
Blast result AT1G78520 : 4.40E-26
Blast annotation: Carbohydrate-binding X8 domain superfamily protein
2.Location
Scaffold: PH01000048
Strand: -
| Region | Start | End |
| gene | 975673 | 977933 |
| mRNA | 975673 | 977933 |
| exon | 975673 | 976249 |
| exon | 976743 | 976771 |
| exon | 977307 | 977933 |
| CDS | 975998 | 976249 |
| CDS | 976743 | 976771 |
| CDS | 977307 | 977382 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Carbohydrate-Binding_Modules | CBM43 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07983.12 | X8 | 37 | 106 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.