PH01000049G1170's details annotation
1.Annotation
ICBR annotation: membrane-anchored ubiquitin-fold protein, putative, expressed
Blast result AT1G22050 : 1.10E-40
Blast annotation: membrane-anchored ubiquitin-fold protein 6 precursor
2.Location
Scaffold: PH01000049
Strand: -
| Region | Start | End |
| gene | 605699 | 609443 |
| mRNA | 605699 | 609443 |
| exon | 605699 | 607245 |
| exon | 607506 | 607618 |
| exon | 608859 | 609443 |
| CDS | 606967 | 607245 |
| CDS | 607506 | 607618 |
| CDS | 608859 | 608991 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13881.5 | Rad60-SLD_2 | 7 | 116 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.