PH01000052G0880's details annotation
1.Annotation
ICBR annotation: BRCA1 C Terminus domain containing protein, expressed
Blast result AT2G26270 : 8.90E-48
Blast annotation: -
2.Location
Scaffold: PH01000052
Strand: +
| Region | Start | End |
| gene | 640150 | 643468 |
| mRNA | 640150 | 643468 |
| exon | 640150 | 641939 |
| exon | 642052 | 642345 |
| exon | 642424 | 642686 |
| exon | 643016 | 643147 |
| exon | 643262 | 643468 |
| CDS | 641753 | 641939 |
| CDS | 642052 | 642345 |
| CDS | 642424 | 642686 |
| CDS | 643016 | 643147 |
| CDS | 643262 | 643408 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.