PH01000058G0070's details annotation
1.Annotation
ICBR annotation: phosphoglycerate mutase, putative, expressed
Blast result AT5G64460 : 1.00E-110
Blast annotation: Phosphoglycerate mutase family protein
2.Location
Scaffold: PH01000058
Strand: +
| Region | Start | End |
| gene | 32828 | 41742 |
| mRNA | 32828 | 41742 |
| exon | 32828 | 36357 |
| exon | 36450 | 36557 |
| exon | 37704 | 37783 |
| exon | 39161 | 39323 |
| exon | 40017 | 40105 |
| exon | 40982 | 41101 |
| exon | 41445 | 41489 |
| exon | 41577 | 41742 |
| CDS | 36298 | 36357 |
| CDS | 36450 | 36557 |
| CDS | 37704 | 37783 |
| CDS | 39161 | 39323 |
| CDS | 40017 | 40105 |
| CDS | 40982 | 41101 |
| CDS | 41445 | 41489 |
| CDS | 41577 | 41691 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00300.21 | His_Phos_1 | 18 | 90 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.