PH01000061G0550's details annotation
1.Annotation
ICBR annotation: secreted salivary protein, putative, expressed
Blast result AT2G25310 : 5.60E-42
Blast annotation: Protein of unknown function (DUF2012)
2.Location
Scaffold: PH01000061
Strand: +
| Region | Start | End |
| gene | 361201 | 365623 |
| mRNA | 361201 | 365623 |
| exon | 361201 | 362122 |
| exon | 364009 | 364072 |
| exon | 364153 | 364269 |
| exon | 364357 | 364465 |
| exon | 365142 | 365623 |
| CDS | 362040 | 362122 |
| CDS | 364009 | 364072 |
| CDS | 364153 | 364269 |
| CDS | 364357 | 364465 |
| CDS | 365142 | 365230 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF09430.9 | DUF2012 | 29 | 106 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.