PH01000061G0590's details annotation
1.Annotation
ICBR annotation: inorganic H+ pyrophosphatase, putative, expressed
Blast result AT1G15690 : 0.00E+00
Blast annotation: Inorganic H pyrophosphatase family protein
2.Location
Scaffold: PH01000061
Strand: +
| Region | Start | End |
| gene | 378036 | 386753 |
| mRNA | 378036 | 386753 |
| exon | 378036 | 380861 |
| exon | 382939 | 383513 |
| exon | 383680 | 384059 |
| exon | 384144 | 384230 |
| exon | 384326 | 384656 |
| exon | 384836 | 385246 |
| exon | 385338 | 385397 |
| exon | 385485 | 386753 |
| CDS | 380594 | 380861 |
| CDS | 382939 | 383513 |
| CDS | 383680 | 384059 |
| CDS | 384144 | 384230 |
| CDS | 384326 | 384656 |
| CDS | 384836 | 385246 |
| CDS | 385338 | 385397 |
| CDS | 385485 | 385691 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03030.15 | H_PPase | 44 | 757 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Oxidative phosphorylation | inorganic pyrophosphatase [EC:3.6.1.1] | ko00190 | K01507 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004427 | inorganic diphosphatase activity |
| GO:0009678 | hydrogen-translocating pyrophosphatase activity |
| GO:0015992 | proton transport |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.